Protein Alignment Rab18 and Rab4

DIOPT Version :9

• Sequence 1: NP_524744.2
• Gene: Rab18 / 44360
• FlyBaseID: FBgn0015794
• Length: 197
• Species: Drosophila melanogaster
• Sequence 2: NP_523777.1
• Gene: Rab4 / 36992
• FlyBaseID: FBgn0016701
• Length: 213
• Species: Drosophila melanogaster
• Alignment Length: 173
• Identity: 77/173 - (44%)
• Similarity: 111/173 - (64%)
• Gaps: 7/173 - (4%)

  Fly     3 DRAIKLLVIGESGVGKSSLIRRFVENKFDQNHDVTIGMDFKSKVMQVDGIDYKVALWDTAGAERF 67
            |...|.|:||.:|.|||.|:..|:|:||..:...|||::|.|:::.|.|...|:.:|||||.|||
  Fly     6 DYLFKFLIIGSAGSGKSCLLHHFIESKFKDDSSHTIGVEFGSRIVNVGGKSVKLQIWDTAGQERF 70

  Fly    68 RSLTPSFYRKALGAILVYDITSRDSLVKLETWLAELDSYSDNPNIAIIVVGNK--IDEERVVDRE 130
            ||:|.|:||.|.||:||||.|||||...|..||.:..:.: :|||.|::||||  ::|.|.|...
  Fly    71 RSVTRSYYRGAAGALLVYDATSRDSFNALTNWLNDARTLA-SPNIVILLVGNKKDLEEARDVTFL 134

  Fly   131 EGRKFARKHRALFIETSAKCDQFVSDVF----KDVVEKIVSSE 169
            |...||:::..:|:|||||..:.|.:.|    |.::.||.:.|
  Fly   135 EASTFAQENELIFLETSAKTGENVEEAFLKCSKTILAKIETGE 177

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rab18	NP_524744.2	RAB	6..166	CDD:197555	74/165 (45%)
		Rab18	6..165	CDD:206656	73/164 (45%)
Rab4	NP_523777.1	Rab4	9..169	CDD:206696	73/160 (46%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C45454541
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
	2	1.840