DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab18 and Rab9

DIOPT Version :10

Sequence 1:NP_524744.2 Gene:Rab18 / 44360 FlyBaseID:FBgn0015794 Length:197 Species:Drosophila melanogaster
Sequence 2:NP_609966.1 Gene:Rab9 / 35221 FlyBaseID:FBgn0032782 Length:256 Species:Drosophila melanogaster


Alignment Length:161 Identity:64/161 - (39%)
Similarity:100/161 - (62%) Gaps:6/161 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 RAIKLLVIGESGVGKSSLIRRFVENKFDQNHDVTIGMDFKSKVMQVDGIDYKVALWDTAGAERFR 68
            :.:|::::|:.|||||:|:.|||.|::::|:..|||::|.:|.:.|||..|.:.:|||||.||||
  Fly    11 KLLKVVILGDGGVGKSALLTRFVANRYEENNFHTIGVEFMNKDIVVDGERYTLQIWDTAGQERFR 75

  Fly    69 SLTPSFYRKALGAILVYDITSRDSLVKLETWLAELDSYS--DNPNIAIIVVGNKID---EERVVD 128
            :|...|||.:...:|.|.:..||||..|..|..|..:|:  |......||||||.|   ::|.|.
  Fly    76 ALRTPFYRGSDICLLCYALDDRDSLKGLGVWRNEFLNYADVDQDKFPFIVVGNKNDIPAQKRQVS 140

  Fly   129 REEGRKFARKHR-ALFIETSAKCDQFVSDVF 158
            .:..:::..:.: |..||||:|....|:|.|
  Fly   141 SDAVQQWCAEQKVACHIETSSKAATNVTDAF 171

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab18NP_524744.2 Rab18 6..165 CDD:206656 64/159 (40%)
Rab9NP_609966.1 Rab9 8..178 CDD:206697 64/161 (40%)

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