DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab18 and RAB7B

DIOPT Version :10

Sequence 1:NP_524744.2 Gene:Rab18 / 44360 FlyBaseID:FBgn0015794 Length:197 Species:Drosophila melanogaster
Sequence 2:NP_796377.3 Gene:RAB7B / 338382 HGNCID:30513 Length:199 Species:Homo sapiens


Alignment Length:171 Identity:56/171 - (32%)
Similarity:96/171 - (56%) Gaps:15/171 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 IKLLVIGESGVGKSSLIRRFVENKFDQNHDVTIGMDFKSKVMQVDGIDYKVALWDTAGAERFRSL 70
            :||:::|..||||:||:.::|...|.:.:..|:|....||::.:.....|:.:|||.|.|||||:
Human     9 LKLIIVGAIGVGKTSLLHQYVHKTFYEEYQTTLGASILSKIIILGDTTLKLQIWDTGGQERFRSM 73

  Fly    71 TPSFYRKALGAILVYDITSRDSLVKLETW----LAEL----DSYSDNPNIAIIVVGNKID-EERV 126
            ..:||:.:.|.||.:|:|..:|...|:.|    ||::    .||      .::::||||| .:|.
Human    74 VSTFYKGSDGCILAFDVTDLESFEALDIWRGDVLAKIVPMEQSY------PMVLLGNKIDLADRK 132

  Fly   127 VDREEGRKFARKHRALFIETSAKCDQFVSDVFKDVVEKIVS 167
            |.:|..:.:.|:....:.|.|||.|..|...|:.:..:.:|
Human   133 VPQEVAQGWCREKDIPYFEVSAKNDINVVQAFEMLASRALS 173

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab18NP_524744.2 Rab18 6..165 CDD:206656 55/167 (33%)
RAB7BNP_796377.3 Rab 9..169 CDD:206640 55/165 (33%)
Switch 1. /evidence=ECO:0000250|UniProtKB:P51149 28..41 2/12 (17%)
Switch 2. /evidence=ECO:0000250|UniProtKB:P51149 67..82 7/14 (50%)

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