DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab18 and Rab35

DIOPT Version :10

Sequence 1:NP_524744.2 Gene:Rab18 / 44360 FlyBaseID:FBgn0015794 Length:197 Species:Drosophila melanogaster
Sequence 2:NP_608373.1 Gene:Rab35 / 33014 FlyBaseID:FBgn0031090 Length:201 Species:Drosophila melanogaster


Alignment Length:175 Identity:66/175 - (37%)
Similarity:111/175 - (63%) Gaps:4/175 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 DRAIKLLVIGESGVGKSSLIRRFVENKFDQNHDVTIGMDFKSKVMQVDGIDYKVALWDTAGAERF 67
            |...|||:||:||||||||:.||.::.|..::..|||:|||.:.:.::|:..|:.:|||||.|||
  Fly     6 DHLFKLLIIGDSGVGKSSLLIRFSDDTFSGSYITTIGVDFKIRTVDIEGMRVKLQIWDTAGQERF 70

  Fly    68 RSLTPSFYRKALGAILVYDITSRDSLVKLETWLAELDSYSDNPNIAIIVVGNKID--EERVVDRE 130
            |::|.::||...|.|:|||:|:.:|...:..||.|:.:..|  .:..::||||.|  :.:||..|
  Fly    71 RTITSTYYRGTHGVIVVYDVTNGESFANVRRWLEEIQNNCD--VVKKVLVGNKNDDPDRKVVITE 133

  Fly   131 EGRKFARKHRALFIETSAKCDQFVSDVFKDVVEKIVSSEYFNNGN 175
            :.::||::......|||||.:..|.::|..:..:::..:...:.|
  Fly   134 DAQRFAKQMDIELFETSAKDNINVENMFLSITRQVLDHKLRTSPN 178

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab18NP_524744.2 Rab18 6..165 CDD:206656 64/160 (40%)
Rab35NP_608373.1 Rab35 3..201 CDD:133310 66/175 (38%)

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