DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab18 and Rab9D

DIOPT Version :10

Sequence 1:NP_524744.2 Gene:Rab18 / 44360 FlyBaseID:FBgn0015794 Length:197 Species:Drosophila melanogaster
Sequence 2:NP_727432.1 Gene:Rab9D / 318149 FlyBaseID:FBgn0067052 Length:197 Species:Drosophila melanogaster


Alignment Length:169 Identity:57/169 - (33%)
Similarity:94/169 - (55%) Gaps:9/169 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 DRAIKLLVIGESGVGKSSLIRRFVENKFDQNHDVTIGMDFKSKVMQVDGIDYKVA----LWDTAG 63
            |...|::::|:|||||:.|:.||.:|:|...|..|:|:|  .:...|:..|:::.    :|||:.
  Fly     5 DNPFKIILLGDSGVGKTCLLMRFSDNQFTTRHRSTVGLD--RRECSVEFADWRMGRMLQVWDTSD 67

  Fly    64 AERFRSLTPSFYRKALGAILVYDITSRDSLVKLETWLAELDSYSDNPNIAIIVVGNKIDE--ERV 126
            .|||:.|..:..|.|.|.:|||||||..|...::.|:.|:.....: .:.:::||||.|:  .|.
  Fly    68 DERFKLLKATQCRSAHGILLVYDITSSKSFQNIDGWMKEIRRLCPD-KVIVLLVGNKSDDPNHRQ 131

  Fly   127 VDREEGRKFARKHRALFIETSAKCDQFVSDVFKDVVEKI 165
            |...:|..:|.:....|.|.|||..:.|.|:|..:...|
  Fly   132 VSMAQGFNYAHRQSICFEEVSAKSGRNVYDIFSSLAMDI 170

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab18NP_524744.2 Rab18 6..165 CDD:206656 55/164 (34%)
Rab9DNP_727432.1 Rab 8..167 CDD:206640 55/161 (34%)

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