DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab18 and Rab27

DIOPT Version :10

Sequence 1:NP_524744.2 Gene:Rab18 / 44360 FlyBaseID:FBgn0015794 Length:197 Species:Drosophila melanogaster
Sequence 2:NP_726743.1 Gene:Rab27 / 31103 FlyBaseID:FBgn0025382 Length:236 Species:Drosophila melanogaster


Alignment Length:203 Identity:71/203 - (34%)
Similarity:118/203 - (58%) Gaps:18/203 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MADRAIKLLVIGESGVGKSSLIRRFVENKFDQNHDVTIGMDFKSKVMQVD--GIDYKVAL--WDT 61
            :|....:.||:|:|||||:.|:.::.:.:|......|:|:||:.|.:..:  |..:::.|  |||
  Fly    13 LAGSGEQFLVLGDSGVGKTCLLYQYTDGRFHTQFISTVGIDFREKRLLYNSRGRRHRIHLQIWDT 77

  Fly    62 AGAERFRSLTPSFYRKALGAILVYDITSRDSLVKLETWLAEL--DSYSDNPNIAIIVVGNKID-- 122
            ||.|||||||.:|||.|:|.:|::|:||..|.::...||::|  .:||::|:  :::.|||.|  
  Fly    78 AGQERFRSLTTAFYRDAMGFLLIFDLTSEKSFLETANWLSQLRTHAYSEDPD--VVLCGNKCDLL 140

  Fly   123 EERVVDREEGRKFARKHRALFIETSAKCDQFVSDVFKDVVEKIVSSEYFNNGNASAGLDIASDRD 187
            :.|||.|::.....|::|..:|||||.....|    |:.||.:|........||:...:.:    
  Fly   141 QLRVVSRDQVAALCRRYRLPYIETSACTGANV----KEAVELLVGRVMERIENAACNREFS---- 197

  Fly   188 LEASASTC 195
            |..:.|.|
  Fly   198 LLLTQSRC 205

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab18NP_524744.2 Rab18 6..165 CDD:206656 64/166 (39%)
Rab27NP_726743.1 P-loop containing Nucleoside Triphosphate Hydrolases 19..187 CDD:476819 65/173 (38%)

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