DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab18 and rab-10

DIOPT Version :10

Sequence 1:NP_524744.2 Gene:Rab18 / 44360 FlyBaseID:FBgn0015794 Length:197 Species:Drosophila melanogaster
Sequence 2:NP_491857.1 Gene:rab-10 / 266836 WormBaseID:WBGene00004273 Length:201 Species:Caenorhabditis elegans


Alignment Length:167 Identity:71/167 - (42%)
Similarity:107/167 - (64%) Gaps:3/167 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 DRAIKLLVIGESGVGKSSLIRRFVENKFDQNHDVTIGMDFKSKVMQVDGIDYKVALWDTAGAERF 67
            |...|||:||:|||||:.::.||.::.|:.....|||:|||.|.:::.|...|:.:|||||.|||
 Worm     7 DMLFKLLLIGDSGVGKTCILYRFSDDAFNTTFISTIGIDFKIKTIELKGKKIKLQIWDTAGQERF 71

  Fly    68 RSLTPSFYRKALGAILVYDITSRDSLVKLETWLAELDSYSDNPNIAIIVVGNKID--EERVVDRE 130
            .::|.|:||.|:|.:||||||:..|...:..||..:|.:: :.::..:::|||.|  :.|||.||
 Worm    72 HTITTSYYRGAMGIMLVYDITNAKSFDNIAKWLRNIDEHA-SEDVVKMILGNKCDMSDRRVVSRE 135

  Fly   131 EGRKFARKHRALFIETSAKCDQFVSDVFKDVVEKIVS 167
            .|.|.|:.|...|.|||||.:..|...|.|:.|.|::
 Worm   136 RGEKIAQDHGISFHETSAKLNVHVDTAFYDLAEAILA 172

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab18NP_524744.2 Rab18 6..165 CDD:206656 69/160 (43%)
rab-10NP_491857.1 Rab8_Rab10_Rab13_like 7..173 CDD:206659 71/167 (43%)

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