DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab18 and RAB12

DIOPT Version :10

Sequence 1:NP_524744.2 Gene:Rab18 / 44360 FlyBaseID:FBgn0015794 Length:197 Species:Drosophila melanogaster
Sequence 2:NP_001020471.3 Gene:RAB12 / 201475 HGNCID:31332 Length:340 Species:Homo sapiens


Alignment Length:168 Identity:65/168 - (38%)
Similarity:111/168 - (66%) Gaps:4/168 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 ADRAIKLLVIGESGVGKSSLIRRFVENKFDQNHDVTIGMDFKSKVMQVDGIDYKVALWDTAGAER 66
            ||..:::::||..||||:||:.||.::.|.:....|:|:|||.|.:::.|...::.:|||||.||
Human   135 ADFKLQVIIIGSRGVGKTSLMERFTDDTFCEACKSTVGVDFKIKTVELRGKKIRLQIWDTAGQER 199

  Fly    67 FRSLTPSFYRKALGAILVYDITSRDSLVKLETWLAELDSYSDNPNIAIIVVGNKID--EERVVDR 129
            |.|:|.::||.|.|.|||||||.:::...|..|:..:|.|: :.:..:::||||:|  .:|.:.|
Human   200 FNSITSAYYRSAKGIILVYDITKKETFDDLPKWMKMIDKYA-SEDAELLLVGNKLDCETDREITR 263

  Fly   130 EEGRKFARKHRAL-FIETSAKCDQFVSDVFKDVVEKIV 166
            ::|.|||::...: |.|.|||.:..|.::|..:|:.|:
Human   264 QQGEKFAQQITGMRFCEASAKDNFNVDEIFLKLVDDIL 301

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab18NP_524744.2 Rab18 6..165 CDD:206656 62/161 (39%)
RAB12NP_001020471.3 Rab12 139..340 CDD:206699 63/164 (38%)

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