DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab18 and rab2a

DIOPT Version :10

Sequence 1:NP_524744.2 Gene:Rab18 / 44360 FlyBaseID:FBgn0015794 Length:197 Species:Drosophila melanogaster
Sequence 2:NP_958862.1 Gene:rab2a / 140617 ZFINID:ZDB-GENE-011212-2 Length:212 Species:Danio rerio


Alignment Length:182 Identity:82/182 - (45%)
Similarity:120/182 - (65%) Gaps:8/182 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 KLLVIGESGVGKSSLIRRFVENKFDQNHDVTIGMDFKSKVMQVDGIDYKVALWDTAGAERFRSLT 71
            |.::||::|||||.|:.:|.:.:|...||:|||::|.::::.:||...|:.:|||||.|.|||:|
Zfish     8 KYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDTAGQESFRSIT 72

  Fly    72 PSFYRKALGAILVYDITSRDSLVKLETWLAELDSYSDNPNIAIIVVGNKIDEE--RVVDREEGRK 134
            .|:||.|.||:||||||.||:...|.|||.:...:| |.|:.|:::|||.|.|  |.|.:|||..
Zfish    73 RSYYRGAAGALLVYDITRRDTFNHLTTWLEDARQHS-NSNMVIMLIGNKSDLESRREVKKEEGEA 136

  Fly   135 FARKHRALFIETSAKCDQFVSDVF----KDVVEKIVSSEYFNNGNASAGLDI 182
            |||:|..:|:|||||....|.:.|    |::.||| ....|:..|.:.|:.|
Zfish   137 FAREHGLIFMETSAKTASNVEEAFINTAKEIYEKI-QEGVFDINNEANGIKI 187

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab18NP_524744.2 Rab18 6..165 CDD:206656 76/163 (47%)
rab2aNP_958862.1 PLN03108 1..188 CDD:178655 82/182 (45%)

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