DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab18 and Rab35

DIOPT Version :10

Sequence 1:NP_524744.2 Gene:Rab18 / 44360 FlyBaseID:FBgn0015794 Length:197 Species:Drosophila melanogaster
Sequence 2:XP_311848.5 Gene:Rab35 / 1272924 VectorBaseID:AGAMI1_007430 Length:202 Species:Anopheles gambiae


Alignment Length:166 Identity:69/166 - (41%)
Similarity:108/166 - (65%) Gaps:4/166 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 DRAIKLLVIGESGVGKSSLIRRFVENKFDQNHDVTIGMDFKSKVMQVDGIDYKVALWDTAGAERF 67
            |...|||:||:||||||||:.||.:|.|..::..|||:|||.:.:.::|...|:.:|||||.|||
Mosquito     6 DHLFKLLIIGDSGVGKSSLLIRFSDNTFSGSYITTIGVDFKIRTVVINGERVKLQIWDTAGQERF 70

  Fly    68 RSLTPSFYRKALGAILVYDITSRDSLVKLETWLAELDSYSDNPNIAIIVVGNKIDE--ERVVDRE 130
            |::|.::||...|.|:|||:|:.:|...::.||.|::|..|..|  .::||||.|:  .:||..|
Mosquito    71 RTITNTYYRGTHGVIVVYDVTNGESFGNVKRWLQEIESNCDIVN--KVLVGNKNDDPTRKVVTTE 133

  Fly   131 EGRKFARKHRALFIETSAKCDQFVSDVFKDVVEKIV 166
            :..:||.:......|||||.:..|.::|..:.|:::
Mosquito   134 DAERFANQMEIKLFETSAKDNLNVEEMFLAITEQVL 169

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab18NP_524744.2 Rab18 6..165 CDD:206656 68/160 (43%)
Rab35XP_311848.5 P-loop containing Nucleoside Triphosphate Hydrolases 3..171 CDD:476819 69/166 (42%)

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