DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab18 and RAB10

DIOPT Version :10

Sequence 1:NP_524744.2 Gene:Rab18 / 44360 FlyBaseID:FBgn0015794 Length:197 Species:Drosophila melanogaster
Sequence 2:NP_057215.3 Gene:RAB10 / 10890 HGNCID:9759 Length:200 Species:Homo sapiens


Alignment Length:195 Identity:75/195 - (38%)
Similarity:118/195 - (60%) Gaps:4/195 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 DRAIKLLVIGESGVGKSSLIRRFVENKFDQNHDVTIGMDFKSKVMQVDGIDYKVALWDTAGAERF 67
            |...|||:||:|||||:.::.||.::.|:.....|||:|||.|.:::.|...|:.:|||||.|||
Human     7 DLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAGQERF 71

  Fly    68 RSLTPSFYRKALGAILVYDITSRDSLVKLETWLAELDSYSDNPNIAIIVVGNK--IDEERVVDRE 130
            .::|.|:||.|:|.:||||||:..|...:..||..:|.:: |.::..:::|||  :|::|||.:.
Human    72 HTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHA-NEDVERMLLGNKCDMDDKRVVPKG 135

  Fly   131 EGRKFARKHRALFIETSAKCDQFVSDVFKDVVEKIVSSEYFNNGNASAGLDIASDRDLEASASTC 195
            :|.:.||:|...|.|||||.:..:...|..:.|.|:........| |..:||:|...:....|.|
Human   136 KGEQIAREHGIRFFETSAKANINIEKAFLTLAEDILRKTPVKEPN-SENVDISSGGGVTGWKSKC 199

  Fly   196  195
            Human   200  199

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab18NP_524744.2 Rab18 6..165 CDD:206656 66/160 (41%)
RAB10NP_057215.3 Rab8_Rab10_Rab13_like 7..173 CDD:206659 68/166 (41%)
Switch 1. /evidence=ECO:0000250|UniProtKB:P62820 32..46 4/13 (31%)
Switch 2. /evidence=ECO:0000250|UniProtKB:P62820 64..81 10/16 (63%)

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