DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Rab18 and Rab15

DIOPT Version :10

Sequence 1:NP_524744.2 Gene:Rab18 / 44360 FlyBaseID:FBgn0015794 Length:197 Species:Drosophila melanogaster
Sequence 2:NP_598811.3 Gene:Rab15 / 104886 MGIID:1916865 Length:212 Species:Mus musculus


Alignment Length:208 Identity:78/208 - (37%)
Similarity:125/208 - (60%) Gaps:14/208 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 DRAIKLLVIGESGVGKSSLIRRFVENKFDQNHDVTIGMDFKSKVMQVDGIDYKVALWDTAGAERF 67
            |...:||:||:|||||:.|:.||.:|:|..:|..|||:|||.|.::||||..::.:|||||.||:
Mouse     6 DVLFRLLLIGDSGVGKTCLLCRFTDNEFHSSHISTIGVDFKMKTIEVDGIKVRIQIWDTAGQERY 70

  Fly    68 RSLTPSFYRKALGAILVYDITSRDSLVKLETWLAELDSYSDNPNIAIIVVGNKIDEE--RVVDRE 130
            :::|..:||:|.|..|||||:|..|...:..|::::|.|:.. .:..|::|||.|||  |.|.||
Mouse    71 QTITKQYYRRAQGIFLVYDISSERSYQHIMKWVSDVDEYAPE-GVQKILIGNKADEEQKRQVGRE 134

  Fly   131 EGRKFARKHRALFIETSAKCDQFVSDVFKDVVEKIVSSEYFN----NGNASAGLDIASDRDLEA- 190
            :|::.|:::...|.||||..:..:.:.|..:.|.::.:....    ...||..|.:|...:.|. 
Mouse   135 QGQQLAKEYGMDFYETSACTNLNIKESFTRLTELVLQAHRKELDGLRTRASNELALAELEEDEGK 199

  Fly   191 ------SASTCYC 197
                  |:.||:|
Mouse   200 PEGPANSSKTCWC 212

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab18NP_524744.2 Rab18 6..165 CDD:206656 68/160 (43%)
Rab15NP_598811.3 Rab15 9..172 CDD:206698 68/163 (42%)
Switch 1. /evidence=ECO:0000250|UniProtKB:P62820 31..45 6/13 (46%)
Switch 2. /evidence=ECO:0000250|UniProtKB:P62820 63..80 8/16 (50%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 192..212 4/19 (21%)

Return to query results.
Submit another query.