DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab18 and rab22a

DIOPT Version :10

Sequence 1:NP_524744.2 Gene:Rab18 / 44360 FlyBaseID:FBgn0015794 Length:197 Species:Drosophila melanogaster
Sequence 2:NP_991282.2 Gene:rab22a / 100001531 ZFINID:ZDB-GENE-041114-161 Length:196 Species:Danio rerio


Alignment Length:199 Identity:77/199 - (38%)
Similarity:117/199 - (58%) Gaps:8/199 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MADRAIKLLVIGESGVGKSSLIRRFVENKFDQNHDVTIGMDFKSKVMQVDGIDYKVALWDTAGAE 65
            |..|.:|:.::|::||||||::.||||:.||.|.:.|||..|.:|.:|.....:|..:|||||.|
Zfish     1 MTLRELKVCLLGDTGVGKSSIVCRFVEDSFDPNINPTIGASFMTKTVQYQNELHKFLIWDTAGQE 65

  Fly    66 RFRSLTPSFYRKALGAILVYDITSRDSLVKLETWLAELDSYSDNPNIAIIVVGNKID--EERVVD 128
            |||:|.|.:||.:..||:|||||..:|...|:.|:.||..:.. |||.:.:.|||.|  :.|.|.
Zfish    66 RFRALAPMYYRGSAAAIIVYDITKEESFQTLKNWVKELRQHGP-PNIVVAIAGNKCDLSDAREVS 129

  Fly   129 REEGRKFARKHRALFIETSAKCDQFVSDVFKDVVEKI--VSSEYFNNGNASAGLDIASDRDLEAS 191
            .::.:.:|....|:|||||||....:::||..:.|:|  :.:|   .|:|..|..:.....:...
Zfish   130 EKDAKDYADSIHAIFIETSAKNAININEVFTQISERIPVLDAE---GGSAVKGFKLRRQPSVSTR 191

  Fly   192 ASTC 195
            ..||
Zfish   192 ERTC 195

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab18NP_524744.2 Rab18 6..165 CDD:206656 68/160 (43%)
rab22aNP_991282.2 Rab5_related 5..167 CDD:206653 68/162 (42%)

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