DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Rab18 and rab32b

DIOPT Version :10

Sequence 1:NP_524744.2 Gene:Rab18 / 44360 FlyBaseID:FBgn0015794 Length:197 Species:Drosophila melanogaster
Sequence 2:XP_021328755.2 Gene:rab32b / 100000199 ZFINID:ZDB-GENE-090821-4 Length:211 Species:Danio rerio


Alignment Length:181 Identity:60/181 - (33%)
Similarity:95/181 - (52%) Gaps:27/181 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 DRAIKLLVIGESGVGKSSLIRRFVENKFDQNHDVTIGMDFKSKVMQVDG-IDYKVALWDTAGAER 66
            :...|:||||:..|||||.::|:|.|:|.:....:||:||..||:..|. ...::.|||.||.||
Zfish    14 EHLFKVLVIGDHKVGKSSFVKRYVRNQFYEELKTSIGVDFSMKVIDWDAHTRVRLQLWDIAGQER 78

  Fly    67 FRSLTPSFYRKALGAILVYDITSRDSLVKLETWLAELDSY----SDNPNIAIIVVGNKIDEERVV 127
            .|.|...::|.:.||.:|||:|:..||.....|..|||..    :.:| |..:::.||.||.:| 
Zfish    79 VRGLNRVYFRGSSGAFVVYDLTNGSSLDGALNWKRELDCQVMLKNGHP-IPAVLLANKCDETKV- 141

  Fly   128 DREEGRKFARKHRALF------------IETSAKCDQFVSDVFKDVVEKIV 166
                    :|::.:|.            .:||||.:..|.:..|.:|:.|:
Zfish   142 --------SRRNASLLEKLCQEKGFTGCFQTSAKENINVDEAAKFLVKHIL 184

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab18NP_524744.2 Rab18 6..165 CDD:206656 59/175 (34%)
rab32bXP_021328755.2 None

Return to query results.
Submit another query.