DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG46339 and Rnpep

DIOPT Version :9

Sequence 1:NP_001263001.1 Gene:CG46339 / 44359 FlyBaseID:FBgn0285963 Length:1194 Species:Drosophila melanogaster
Sequence 2:NP_112359.2 Gene:Rnpep / 81761 RGDID:621137 Length:650 Species:Rattus norvegicus


Alignment Length:663 Identity:144/663 - (21%)
Similarity:236/663 - (35%) Gaps:185/663 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   295 RPLHYSLLIEPSVATSIS---------------------------NGSLTIEIERDVSKVTSWEP 332
            ||||.:..::.:.|:|..                           ||..|:|:...:.:..|  .
  Rat    15 RPLHSAQAVDVASASSFRAFEILHLHLDLRAEFGPPGPGPGSRGLNGKATLELRCLLPEGAS--E 77

  Fly   333 IVLDVHN-VSISNVRVIRALADGASNASEEQDLDFD--SDYGEDNATFVINLSKTLAVETQLRVL 394
            :.||.|: :.:....::|.........:|.......  |.||:  |..|:......|.|   |..
  Rat    78 LRLDSHSCLEVMAATLLRGQPGDQQQLTEPVPFHTQPFSHYGQ--ALCVVFPKPCCAAE---RFR 137

  Fly   395 LSLDFVSQVTDTLQGIYKTSYTNPDTKNEEWM------------ISTQFSPVDARRAFPCFDRPD 447
            |.|                :|...:.....|:            :.||...|..|..|||||.|.
  Rat   138 LEL----------------TYRVGEGPGVCWLAPEQTAGKKKPFVYTQGQAVLNRAFFPCFDTPA 186

  Fly   448 MKANFSISIVRPMQFKMALSNMPKSGSRRFRRGFIRDDFETTPKMPTYLVAFIVSNMVDSRLASQ 512
            :|..:|..:..|..|...:     |.|...|||..:..|:....:|:||:|..:.:     |||.
  Rat   187 VKCTYSALVEVPDGFTAVM-----SASTWERRGPNKFFFQMNQPIPSYLIALAIGD-----LASA 241

  Fly   513 DSGLTPRVEIWTRPQFVGMTHYAYK-MVRKFLPYYEDFFGIKNKLP----KIDLVSV-PDFGFAA 571
            :.|  ||..:|..|..:......|. ::.:||...|..||     |    :.||:.: |.|.|..
  Rat   242 EVG--PRSRVWAEPCLIEAAKEEYNGVIEEFLATGEKLFG-----PYVWGRYDLLFMPPSFPFGG 299

  Fly   572 MENWGLITFRDSALLVPEDLQLASSSEHMQVVAGIIAHELAHQWFGNLVTPKWWDDLWLKEGFAC 636
            ||| ..:||....||..:           :.:|.:|.||::|.|||||||...|.:.||.|||..
  Rat   300 MEN-PCLTFVTPCLLAGD-----------RSLADVIIHEISHSWFGNLVTNANWGEFWLNEGFTM 352

  Fly   637 Y-----------MSYKALEHAHPEF---QSMDT------LTMLEFKESMEHDADNTSHAISFDVR 681
            |           .:|..||.|....   |.||.      |..|..|.....|.|:|         
  Rat   353 YAQRRISTILFGAAYTCLEAATGRALLRQHMDVSGEENPLNKLRVKIEPGVDPDDT--------- 408

  Fly   682 STNDVRRIFDPISYSKGTILLRMLNSIVGD-VAFRSATRDLLKKFAYGNMDRDDLWAMLTRHGHE 745
                    ::...|.||...:..|..:||| ..|....:..:.:|.:.::..:|.......:..|
  Rat   409 --------YNETPYEKGYCFVSYLAHLVGDQEQFDKFLKAYVDEFKFQSILAEDFLEFYLEYFPE 465

  Fly   746 QGTLPKDLSVKQI----MDSWITQPGYPVVNVERRGADLVLRQERYLLPSKNTADQ--------- 797
            .    |...|..|    .:.|:..||:|....:....|.:::      |::..|:.         
  Rat   466 L----KKKGVDSIPGFEFNRWLNTPGWPPYLPDLSPGDSLMK------PAEELAELWAASEPDMQ 520

  Fly   798 -------STW-FIPITFETDELRKGDNIPTHWMRSEDEEELIVGNVFAHSSNSDN---------V 845
                   ||| ...:.:..|::.:...:|...::.       :|..:...||:.|         :
  Rat   521 AIEAVAISTWKTYQLVYFLDKILQKSPLPPGNVKK-------LGETYPKISNAQNAELRLRWGQI 578

  Fly   846 IYLNLNRQGYYRV 858
            |..|.:::.:::|
  Rat   579 ILKNDHQEEFWKV 591

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG46339NP_001263001.1 Peptidase_M1 296..698 CDD:279741 111/469 (24%)
M1_APN_2 297..769 CDD:189008 126/544 (23%)
ERAP1_C 846..1138 CDD:288671 3/13 (23%)
RnpepNP_112359.2 M1_LTA4H 24..484 CDD:341062 122/532 (23%)
Substrate binding. /evidence=ECO:0000250 298..302 1/3 (33%)
Leuk-A4-hydro_C 530..645 CDD:401171 10/69 (14%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.910

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