DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG46339 and lta4h

DIOPT Version :10

Sequence 1:NP_001263001.1 Gene:CG46339 / 44359 FlyBaseID:FBgn0285963 Length:1194 Species:Drosophila melanogaster
Sequence 2:NP_998451.1 Gene:lta4h / 406575 ZFINID:ZDB-GENE-040426-2477 Length:611 Species:Danio rerio


Alignment Length:645 Identity:139/645 - (21%)
Similarity:226/645 - (35%) Gaps:195/645 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   267 PVVEPAA-GEVEDNTTKPINRPLKLYEGWRPLHYSLLIEPSVATSISNG--SLTIEIERDVSKVT 328
            ||.:|:: ..:...:||               |.:|:........:..|  :||:|:..|     
Zfish     3 PVSDPSSFSSLSKCSTK---------------HLNLIYHVDFDRHVLKGKVALTVEVLED----- 47

  Fly   329 SWEPIVLDVHNVSISNVRVIRALAD---GASNASEEQDLDFDSDYGEDNATFVINLSKTLAVETQ 390
            .:..:.||..::.||.|......|.   ||.:..:...|:.         |....||:...|..:
Zfish    48 KFSSLTLDSKDLKISKVSANGQAAKFELGAKHKFKGSPLEI---------TLPFELSRGQHVIVE 103

  Fly   391 LRVLLSLDFVSQVTDTLQGIYKTSYTNPDTKNEEWMISTQ---------FSPVDA---RRAFPCF 443
            :.                  |:||   |.....:|:...|         ||...|   |...||.
Zfish   104 IE------------------YETS---PTATALQWLTPKQTAGKKHPYLFSQCQATHCRTMVPCQ 147

  Fly   444 DRPDMKANFSISIVRPMQFKMALSNM-------PKSGSR---RFRRGFIRDDFETTPKMPTYLVA 498
            |.|.:|..:...:..|.:....:|.:       |...||   |||        :..| ||:||:|
Zfish   148 DTPSVKHTYYAQVSVPRELVALMSALRDGQEPDPSDSSRVIYRFR--------QPVP-MPSYLIA 203

  Fly   499 FIVSNMVDSRLASQDSGLTPRVEIWTRPQFVGMTHYAYKMVRKFLPYYEDFFGIKNKLPKI---- 559
            .:|     ..|.|::.|  ||..:|:..::|....|.:......|...|...|     |.:    
Zfish   204 IVV-----GALESREIG--PRSRVWSEKEYVDEAAYEFAETETMLKTAESLAG-----PYVWGQY 256

  Fly   560 -DLVSVPDFGFAAMENWGLITFRDSALLVPEDLQLASSSEHMQVVAGIIAHELAHQWFGNLVTPK 623
             .||..|.|.:..||| ..:||....:|..:           :.:||:||||::|.|.|||||.:
Zfish   257 DVLVLPPSFPYGGMEN-PCLTFVTPTVLAGD-----------RSLAGVIAHEISHSWTGNLVTNR 309

  Fly   624 WWDDLWLKEGFACYM--------------------SYKALEHAHPEFQSMDTLTMLEFKESMEHD 668
            .|:..||.||...|:                    .:|.|..:..:|.:.:.||.| .....|.|
Zfish   310 TWEHFWLNEGHTVYIERMIARCMEGEQLRQFKGIGGWKELHESVKQFGANNVLTNL-VPNLHEVD 373

  Fly   669 ADNTSHAISFDVRSTNDVRRIFDPISYSKGTILLRMLNSIV-GDVAFRSATRDLLKKFAYGNMDR 732
            .|..                 |..:.|.||..||..|..:: |...|....:..::.||||::..
Zfish   374 TDEA-----------------FSSVPYEKGFALLYHLEELMGGPEVFMGFVKSYIQLFAYGSVTT 421

  Fly   733 DDLWAMLTRHGHEQGTLPKDLSVKQIMDSWITQPGYPVVN------------------VERRGAD 779
            ::....|..:..::    .|:..|...::|:..||...|.                  |:.:.||
Zfish   422 EEWKNYLFTYFKDK----VDILNKVDWNAWMHTPGMAPVRPQYDTTMADACTSLCQKWVKAKEAD 482

  Fly   780 LVLRQERYLLPSKNTADQSTWFIPITFETD-----------ELRKGDNIPT-----HWMR 823
            |....|..:  .:..:.|...|:.:..:.|           |:.|.:||..     .|:|
Zfish   483 LASFTEADV--KQLNSPQLIEFMALLLQEDPLPLSHVKKMGEVYKLNNIKNAEVRFRWLR 540

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG46339NP_001263001.1 M1_APN-Q_like 297..764 CDD:341064 117/519 (23%)
ERAP1_C 846..1126 CDD:463368
lta4hNP_998451.1 leuko_A4_hydro 18..607 CDD:274120 136/630 (22%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.