DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG46339 and Trhde

DIOPT Version :10

Sequence 1:NP_001263001.1 Gene:CG46339 / 44359 FlyBaseID:FBgn0285963 Length:1194 Species:Drosophila melanogaster
Sequence 2:NP_001102461.1 Gene:Trhde / 366894 RGDID:728895 Length:1066 Species:Rattus norvegicus


Alignment Length:962 Identity:288/962 - (29%)
Similarity:468/962 - (48%) Gaps:116/962 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly   262 KVGDI-----PVVEPAAGEVEDNTTKPINRPLKLYEGWRPLHYSLLIEPSVATSISNGSLTIEIE 321
            ::|::     |...|.: |.|....:|..: |:|....:||||:|::...:.....:|.:.:||.
  Rat   152 EIGEVGTAGTPSAHPPS-EEEQEQWQPWTQ-LRLSGHLKPLHYNLMLTAFMENFTFSGEVNVEIA 214

  Fly   322 RDVSKVTSWEPIVLDVHNVSISNVRVIRALADGASNAS------EEQDLDFDSDYGEDNATFVIN 380
              ....|.:  :||....|::..|:|....|.||...:      :.|.|             |:.
  Rat   215 --CQNATRY--VVLHASRVAVEKVQVAEDRAFGAVPVAGFFLYPQTQVL-------------VVV 262

  Fly   381 LSKTLAVETQLRVLLSLDFVSQVTDTLQGIYKTSYTNPDTKNEEWMISTQFSPVDARRAFPCFDR 445
            |::||  :.|....|.:.:.:.:.:.|.|.:::||.....:  .::..|||||..||:||||||.
  Rat   263 LNRTL--DAQRHYNLKIIYNALIENELLGFFRSSYVIHGER--RFLGVTQFSPTHARKAFPCFDE 323

  Fly   446 PDMKANFSISIVRPMQFKMALSNMPKSGSRRFRRGFIRDDFETTPKMPTYLVAFIVSNMVDSRLA 510
            |..||.|.|||.....: ::|||||...|.....|::.|.|..||.|.||.:|:.:.|.. .|..
  Rat   324 PIYKATFKISIKHQATY-LSLSNMPVETSVFEEDGWVTDHFSQTPLMSTYYLAWAICNFT-YRET 386

  Fly   511 SQDSGLTPRVEIWTRPQFV--GMTHYAYKMVRKFLPYYEDFFGIKNKLPKIDLVSVPDFGFAAME 573
            :..||:.  |.::.||..:  |...||..:.::.:.:|||:|.:...|||:||::||...:||||
  Rat   387 TTKSGVV--VRLYARPDAIRRGSGDYALHITKRLIEFYEDYFKVPYSLPKLDLLAVPKHPYAAME 449

  Fly   574 NWGLITFRDSALLVPEDLQLASSSEHMQVVAGIIAHELAHQWFGNLVTPKWWDDLWLKEGFACYM 638
            ||||..|.:..:|:...:   ||..::..|..:|.||:.|||||:||||.||:|:|||||||.|.
  Rat   450 NWGLSIFVEQRILLDPSV---SSISYLLDVTMVIVHEICHQWFGDLVTPVWWEDVWLKEGFAHYF 511

  Fly   639 SYKALEHAHPEFQSMDTLTMLE--FKESMEHDADNTSHAISFDVRSTNDVRRIFDPISYSKGTIL 701
            .:...::.:|.: :|:....|.  ..|.|..|...:||.:|.:|....|:.::||.|:|.||..|
  Rat   512 EFVGTDYLYPSW-NMEKQRFLTDVLHEVMLLDGLASSHPVSQEVLRATDIDKVFDWIAYKKGAAL 575

  Fly   702 LRMLNSIVGDVAFRSATRDLLKKFAYGNMDRDDLWAMLTRHGHEQGTLPKDLSVKQIMDSWITQP 766
            :|||.:.:|...|:...:|.|....|||..|:|||..|:......|   |.::::::||.|..|.
  Rat   576 IRMLANFMGHSVFQRGLQDYLTIHKYGNAARNDLWNTLSEALKRNG---KYVNIQEVMDQWTLQM 637

  Fly   767 GYPVVNV------ERRGADLVLRQERYL--LPSKNTADQ-----STWFIPITFETDELRKGDNIP 818
            ||||:.:      |.|   :::.|:.::  :.:|..|.|     ..|.||:|.....        
  Rat   638 GYPVITILGNMTAENR---ILITQQHFIYDIGAKTKALQLQNSSYLWQIPLTIVVGN-------- 691

  Fly   819 THWMRSEDEEELIVGNVFAHSSNSDNVIYL--------NLNRQGYYRVNYDMTSWL----ALKKN 871
                ||....|.|:.  .::.|....:.||        |:|:.||:|||||:.:|.    .|.:|
  Rat   692 ----RSHVSSEAIIW--VSNKSEHHRITYLDKGSWILGNINQTGYFRVNYDLRNWRLLIDQLIRN 750

  Fly   872 FSTLPRITRAQLLDDALHLSQAEYLTYDIPLTFLMELFDAVDDELLWIAAKPGLNYLIYNLKREP 936
            ...|....||.|:|||..|::|.||..:|||..:..|.:. .|.|.|.||...|..|...|.|  
  Rat   751 HEVLSVSNRAGLIDDAFSLARAGYLPQNIPLEIIRYLSEE-KDFLPWHAASRALYPLDKLLDR-- 812

  Fly   937 AYETFRAFMKFIVRPAFDHYG-LHEPDNE----------SHLQLKHRALVAYFACKFNYDRCTQK 990
             .|.:..|.::|::.....|. |..|.|.          .|.:|:...::  .||.|....|.|:
  Rat   813 -MENYNIFNEYILKQVATTYSKLGWPKNNFNGSVVQASYQHEELRREVIM--LACSFGNKHCHQQ 874

  Fly   991 AQMKFREWMRDPKNNPIKPNLKSVIYCTSLAEGSSPEWYFAYKQYKTTTSASEKEEILTSLGCTT 1055
            |.....:|:...:|. |..|::.::|||.::......|.|.:.::.:||:.|||:.:|.:|.|:.
  Rat   875 ASTLISDWISSNRNR-IPLNVRDIVYCTGVSLLDEDVWEFIWMKFHSTTAVSEKKILLEALTCSD 938

  Fly  1056 KPWLLSKYLNMTINPTSGILKQDGALAFRAVASNAIGHEIAFDFLQGNIKEIVEYYGDGFSTLSE 1120
            ...|||:.||:::| :..:|.||.......||.|..|.::|:.|.:...|.:...||:.....|:
  Rat   939 DRNLLSRLLNLSLN-SEVVLDQDAIDVIIHVARNPHGRDLAWKFFRDKWKILNTRYGEALFMNSK 1002

  Fly  1121 MIKSLTIYMNKDYHKHQLLDLAATCRKLGLHAVESA-IELALEQVNNNIYWR 1171
            :|..:|.::|.:....:|.:...:     ...|.|| ...|:|.|..|:.|:
  Rat  1003 LISGVTEFLNTEGELKELKNFMKS-----YDGVASASFSRAVETVEANVRWK 1049

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG46339NP_001263001.1 M1_APN-Q_like 297..764 CDD:341064 158/476 (33%)
ERAP1_C 846..1126 CDD:463368 90/302 (30%)
TrhdeNP_001102461.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..43
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 117..177 5/25 (20%)
M1_APN-Q_like 190..635 CDD:341064 158/476 (33%)
ERAP1_C 720..1044 CDD:463368 97/336 (29%)
Blue background indicates that the domain is not in the aligned region.

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