DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG46339 and Lta4h

DIOPT Version :9

Sequence 1:NP_001263001.1 Gene:CG46339 / 44359 FlyBaseID:FBgn0285963 Length:1194 Species:Drosophila melanogaster
Sequence 2:NP_001025202.1 Gene:Lta4h / 299732 RGDID:1311333 Length:611 Species:Rattus norvegicus


Alignment Length:536 Identity:123/536 - (22%)
Similarity:203/536 - (37%) Gaps:131/536 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   297 LHYSLLIEPSVATSISNGSLTIEIERDVSKVTSWEPIVLDVHNVSISNVRVIRALADGASNASEE 361
            ||....::.:........:||::.:.|     :...:.||..:::|..| ||..           
  Rat    22 LHLRCSVDFARRALTGTAALTVQSQED-----NLRSLTLDTKDLTIEKV-VING----------- 69

  Fly   362 QDLDFDSDYGEDNATFVINLSKTLAVETQLRVLLSLDFVSQVTDTLQGIYKTSYTNPDTKNEEWM 426
            |::.:.....:......:.:|..:|:.....|::.:.|               .|:|.:...:|:
  Rat    70 QEVKYTLGESQGYKGSPMEISLPIALSKNQEVVIEISF---------------ETSPKSSALQWL 119

  Fly   427 ------------ISTQFSPVDARRAFPCFDRPDMKANFSISIVRPMQFKMALSNM-------PKS 472
                        :.:|...:..|...||.|.|.:|..::..:..|.:....:|.:       |:.
  Rat   120 TPEQTSGKQHPYLFSQCQAIHCRAILPCQDTPSVKLTYTAEVSVPKELVALMSAIRDGEAPDPED 184

  Fly   473 GSRRFRRGFIRDDFETTPKMPTYLVAFIVSNMVDSRLASQDSGLTPRVEIWTRPQFVGMTHYAYK 537
            .||:..|      |.....:|.||:|.:|     ..|.|:..|  ||..:|:..:.|..:.|.:.
  Rat   185 PSRKIYR------FNQRVPIPCYLIALVV-----GALESRQIG--PRTLVWSEKEQVEKSAYEFS 236

  Fly   538 MVRKFLPYYEDFFGIKNKLPKI----D-LVSVPDFGFAAMENWGLITFRDSALLVPEDLQLASSS 597
            .....|...||..|     |.:    | ||..|.|.:..||| ..:||....||..:        
  Rat   237 ETESMLKIAEDLGG-----PYVWGQYDLLVLPPSFPYGGMEN-PCLTFVTPTLLAGD-------- 287

  Fly   598 EHMQVVAGIIAHELAHQWFGNLVTPKWWDDLWLKEGFACYMSY--------KALEHAHP-----E 649
               :.::.:||||::|.|.|||||.|.||..||.||...|:..        :...|.|.     |
  Rat   288 ---KSLSNVIAHEISHSWTGNLVTNKTWDHFWLNEGHTVYLERHICGRLFGEKFRHFHALGGWGE 349

  Fly   650 FQSMDTLTMLEFKESMEHDADNTSHAISFDVRSTNDVRRIFDP------ISYSKGTILLRMLNSI 708
            .|:    |:..|.|         ||..:..|....||    ||      |.|.||..||..|..:
  Rat   350 LQN----TIKTFGE---------SHPFTKLVVDLKDV----DPDVAYSSIPYEKGFALLFYLEQL 397

  Fly   709 V-GDVAFRSATRDLLKKFAYGNMDRDDLWAMLTRHGHEQGTLPKDLSVKQIMDSWITQPGYPVV- 771
            : |...|....:..::||:|.::..||..:.|..|..::    .||..:...::|:..||.|.| 
  Rat   398 LGGPEVFLGFLKAYVEKFSYQSVTTDDWKSFLYAHFKDK----VDLLNQVDWNAWLYAPGLPPVK 458

  Fly   772 ---NVERRGADLVLRQ 784
               :|....|.:.|.|
  Rat   459 PNYDVTLTNACIALSQ 474

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG46339NP_001263001.1 Peptidase_M1 296..698 CDD:279741 98/443 (22%)
M1_APN_2 297..769 CDD:189008 117/515 (23%)
ERAP1_C 846..1138 CDD:288671
Lta4hNP_001025202.1 leuko_A4_hydro 6..608 CDD:274120 123/536 (23%)
Substrate binding. /evidence=ECO:0000250|UniProtKB:P09960 135..137 1/1 (100%)
Substrate binding. /evidence=ECO:0000250|UniProtKB:P09960 267..272 0/4 (0%)
Substrate binding. /evidence=ECO:0000250|UniProtKB:P09960 564..566
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.910

Return to query results.
Submit another query.