DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG46339 and pam-1

DIOPT Version :9

Sequence 1:NP_001263001.1 Gene:CG46339 / 44359 FlyBaseID:FBgn0285963 Length:1194 Species:Drosophila melanogaster
Sequence 2:NP_001023210.1 Gene:pam-1 / 177528 WormBaseID:WBGene00003914 Length:948 Species:Caenorhabditis elegans


Alignment Length:850 Identity:238/850 - (28%)
Similarity:393/850 - (46%) Gaps:87/850 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly   296 PLHYSLLIEPSVATSISNGSLTIEIERDVSKVTSWEPIVLDVH--NVSISNVRVIRALADGASNA 358
            |.||::.:.|.:.....:|..||::  .:.:.|.    ||.||  ::.|.:|.:|....|.:.: 
 Worm    86 PTHYNVRLSPCLNQFSFDGHATIDV--TIKEATD----VLKVHAQSLLIQSVSLITQPGDASKS- 143

  Fly   359 SEEQDLDFDSDYGEDNATFVINLSKTLAVETQLRVLLSLDFVSQVTDTLQGIYKTSYTNPDTKN- 422
                   .::.|.:......|.|..|:..:   :|.|...||.::.|.::|.|::.|.:   || 
 Worm   144 -------LETSYDDKLNILTIKLPTTMQPQ---KVQLDFKFVGELNDKMRGFYRSQYKD---KNG 195

  Fly   423 -EEWMISTQFSPVDARRAFPCFDRPDMKANFSISIVRPMQFKMALSNM------PKSGSRRFRRG 480
             |:::.||||....||.||||||.|..||.|.::: .......|||||      |.:..:|    
 Worm   196 TEKFLASTQFESTYARYAFPCFDEPIYKATFDVTL-EVENHLTALSNMNVISETPTADGKR---- 255

  Fly   481 FIRDDFETTPKMPTYLVAFIVSNMVDSRLASQDSGLTPRVEIWTRPQFVGMTHYAYKMVRKFLPY 545
             ....|.|:|||.:|||||.|..: :...|...||:..||  :|.|.......|:..:..|.:.:
 Worm   256 -KAVTFATSPKMSSYLVAFAVGEL-EYISAQTKSGVEMRV--YTVPGKKEQGQYSLDLSVKCIDW 316

  Fly   546 YEDFFGIKNKLPKIDLVSVPDFGFAAMENWGLITFRDSALLVPEDLQLASSSEHMQVVAGIIAHE 610
            |.::|.||..|||.||:::|||...|||||||:|:|:.||||...:   :|:.....||.::|||
 Worm   317 YNEWFDIKYPLPKCDLIAIPDFSMGAMENWGLVTYREIALLVDPGV---TSTRQKSRVALVVAHE 378

  Fly   611 LAHQWFGNLVTPKWWDDLWLKEGFACYMSYKALEHAHPEFQSMDTLTMLEFKESMEHDADNTSHA 675
            |||.|||||||.|||.|||||||||.:|.|..:....|||:........|....|..||...||.
 Worm   379 LAHLWFGNLVTMKWWTDLWLKEGFASFMEYMFVGANCPEFKIWLHFLNDELASGMGLDALRNSHP 443

  Fly   676 ISFDVRSTNDVRRIFDPISYSKGTILLRMLNSIVGDVAFRSATRDLLKKFAYGNMDRDDLWAMLT 740
            |..::.:.|::..|:|.|:|:|...:.|||...:.:..|:...|..||:|.|.|....|||..|:
 Worm   444 IEVEIDNPNELDEIYDSITYAKSNSVNRMLCYYLSEPVFQKGLRLYLKRFQYSNAVTQDLWTALS 508

  Fly   741 RHGHEQGTLPKDLSVKQIMDSWITQPGYPVVNVERR----GADLVLRQERYLLPSKNTADQSTWF 801
            ....:        :|.::|..|..|.|:||:.|.:|    ...|.:.|.|::.........|.|.
 Worm   509 EASGQ--------NVNELMSGWTQQMGFPVLKVSQRQDGNNRILTVEQRRFISDGGEDPKNSQWQ 565

  Fly   802 IPITFETDELRKGDNIPTHWMRSEDEEELIVGNVFAHSSNSDNVIYLNLNRQGYYRVNYDMTSWL 866
            :|||.....  ...::...::..|.::|..:..|     .....:.||....|:|||.|......
 Worm   566 VPITVAVGS--SPSDVKARFLLKEKQQEFTIEGV-----APGEWVKLNSGTTGFYRVEYSDEMLT 623

  Fly   867 ALKKNFST--LPRITRAQLLDD--AL----HLSQAEYLTYDIPLTFLMELFDAVDDE-LLWIAAK 922
            |:..:.::  :|.:.|..|::|  ||    .:|.|:::.        :....|.:|| ::|.|..
 Worm   624 AMLPDIASRRMPVLDRFGLINDLSALLNTGRVSIAQFVQ--------VAASSAKEDEYVVWGAID 680

  Fly   923 PGLNYLIYNLKREPAYETFRAFMKFIVRPAFD----HYGLHEPDNESHLQLKHRALVAYFACKFN 983
            .|::.|: ...||.:.:|.::..:.:|: .|:    ..|..|...|...::..|:||.....:..
 Worm   681 EGMSKLL-ACAREMSEDTLKSAKQLVVK-MFEQTGAELGFAEQAGEDSQKMMLRSLVQARLARAG 743

  Fly   984 YDRCTQKAQMKFREWMRDPKNNPIKPNLKSVIYCTSLAEGSSPEWYFAYKQYKTTTSASEKEEIL 1048
            :.....|....|.:::.  |..||.|:::...:......|....:.......:|||....:.:.:
 Worm   744 HQPTIDKFTQMFNDFLE--KGTPIHPDIRLATFGVVARYGGKEGFDKLMNLRETTTFQEIERQTM 806

  Fly  1049 TSLGCTTKPWLLSKYLNMTINPTSGILKQDGALAFRAVASNAIGHEIAFDFLQGNIKEIVEYYGD 1113
            .::..|.:..||::.......... :..||....|....:..:|.:.|:.:...:|||.::.||.
 Worm   807 VAMSQTPEESLLAQLFEYGFEKNK-VRPQDQLYLFLGTGATHMGQQYAWKYFCEHIKEFLDKYGG 870

  Fly  1114 GFSTL 1118
            ..|:|
 Worm   871 ANSSL 875

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG46339NP_001263001.1 Peptidase_M1 296..698 CDD:279741 144/411 (35%)
M1_APN_2 297..769 CDD:189008 163/481 (34%)
ERAP1_C 846..1138 CDD:288671 58/285 (20%)
pam-1NP_001023210.1 M1_APN_2 87..529 CDD:189008 163/481 (34%)
ERAP1_C 602..927 CDD:314669 58/286 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D110058at2759
OrthoFinder 1 1.000 - - FOG0000044
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11533
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X67
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
55.020

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