DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG46339 and rnpepl1

DIOPT Version :9

Sequence 1:NP_001263001.1 Gene:CG46339 / 44359 FlyBaseID:FBgn0285963 Length:1194 Species:Drosophila melanogaster
Sequence 2:NP_001335117.1 Gene:rnpepl1 / 100535895 ZFINID:ZDB-GENE-030131-5522 Length:692 Species:Danio rerio


Alignment Length:728 Identity:166/728 - (22%)
Similarity:266/728 - (36%) Gaps:211/728 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   282 KPINRPLKLYEGWRPLHYSLLIEPSVATS-----ISNGSLTIEIERDVSKVTSW----------- 330
            |.:..|.|..||.|.|.:..|::.:.|::     :.:..|.:.:...|.::|.|           
Zfish    14 KVLTVPGKSCEGGRSLAHCRLVDIASASNFHCFKLRHFHLDLHLNFAVKRITGWQVLELTPVQPG 78

  Fly   331 -EPIVLDVHNVSISNVRVIRALADGASNA-----SEEQDLDFDSDYGEDNATFVINLSKTLAVET 389
             :.::||.|...:  :..:.....|||.|     |....::..:|||..     :|::...||..
Zfish    79 VQSLILDTHPSLL--IHSVDCKVPGASGAPDVFLSLTYRVEPFTDYGSS-----LNITLPAAVIR 136

  Fly   390 QLRVLLSLDFVSQVTDTLQGIYKTSYTNPDTKNEEW------------MISTQFSPVDARRAFPC 442
            ..|..       :||        ..||..|.....|            ::.||...|..|..|||
Zfish   137 PHRAF-------RVT--------VRYTTTDGPAIWWLDAELTCGQTRPLVFTQGHSVCNRSFFPC 186

  Fly   443 FDRPDMKANFSISIVRPMQFKMALSNMPKSGSRRFRRGFIRDDFETTPKMPTYLVAFIVSNMVDS 507
            ||.|.:|:.:| :.||..:....|.:..:|...:..|.|   .|.....:|.||||.:..::   
Zfish   187 FDTPAVKSTYS-ATVRVPEGVTVLMSASRSAYSKQDRVF---QFSMEYPVPAYLVALVAGDL--- 244

  Fly   508 RLASQDSGLTPRVEIWTRPQFVGMTHYAYKM---VRKFLPYYEDFFGIKNKLP----KIDLVSV- 564
                |.:.:.||..:|..|..  :|....|:   |.::|...|..||     |    :.|||.: 
Zfish   245 ----QHADIGPRSRVWAEPCI--LTCAVSKLGGSVERWLNVAEGLFG-----PYVWGRYDLVFLP 298

  Fly   565 PDFGFAAMENWGLITFRDSALLVPEDLQLASSSEHMQVVAGIIAHELAHQWFGNLVTPKWWDDLW 629
            |.|...|||| ..:||..|::|..::..|..           :.||:||.||||.||...|:::|
Zfish   299 PSFPIVAMEN-PCLTFIISSILESQEFLLID-----------VIHEIAHGWFGNAVTNATWEEMW 351

  Fly   630 LKEGFACYMSYKALEHAHPE-FQSMDTLTMLEFKESMEHDADNTSHAISFDVRSTNDVRRIFDP- 692
            |.||.|.|...:....|:.| |..::|:..|        ||.:....:..|....:.::..|:| 
Zfish   352 LSEGLATYAQRRITTEAYGEAFTCLETVFRL--------DALHRQMRLLGDNNPVSKLQAKFEPG 408

  Fly   693 ---------ISYSKGTILLRMLNSIVGDV-AFRSATRDLLKKFAYGNMDRDDL------------ 735
                     .:|.||...:..|:.:.||: .|.|..|..::||.:.::...||            
Zfish   409 VNPSSLMNLFTYEKGFCFVSYLSQLCGDIKRFDSFLRAYIEKFRFSSVIAQDLLDFFLGFFPELK 473

  Fly   736 -WAMLTRHGHE-----QGTLP----KDLS--------VKQIMDSWITQ-PGYPVVNVERRGADLV 781
             ..:..|.|.|     .|..|    .|||        |:.:.|.|... |...|:          
Zfish   474 EGCVAQREGLEFERWLNGCGPPLCEPDLSAGRTLTGPVQHLCDLWGNDAPDTQVI---------- 528

  Fly   782 LRQERYLLPSKNTADQSTWFIPITFETDELRKGDNIPTHWMRSEDEEELIVGNVFAHSSNSDNVI 846
                       :|.|.|:|   .||:|                    .|.:..:...|..|..| 
Zfish   529 -----------STFDLSSW---STFQT--------------------VLFLDRLLDRSPLSQEV- 558

  Fly   847 YLNLNRQGYYRVNYDMTS-----WLALKKNFSTLPRITRAQLLDDALHLSQAEYLTYDIPL---- 902
             ::|....|..:..||.:     ||.:....|..|.:.|.:   ..||...:.  .|.:||    
Zfish   559 -MSLLSSCYAALLDDMNAEVQIRWLQIVVRNSFYPDLPRVR---SFLHKHTSR--MYTVPLYEDL 617

  Fly   903 ------TFLMELF 909
                  .|.:|:|
Zfish   618 CGGVMKCFAVEVF 630

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG46339NP_001263001.1 Peptidase_M1 296..698 CDD:279741 107/454 (24%)
M1_APN_2 297..769 CDD:189008 131/556 (24%)
ERAP1_C 846..1138 CDD:288671 17/79 (22%)
rnpepl1NP_001335117.1 M1_LTA4H 36..490 CDD:189006 120/513 (23%)
Leuk-A4-hydro_C 507..649 CDD:312599 33/175 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170590612
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.840

Return to query results.
Submit another query.