DRSC/TRiP Functional Genomics Resources

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Protein Alignment drl and Fgfr3

DIOPT Version :10

Sequence 1:NP_001260566.1 Gene:drl / 44355 FlyBaseID:FBgn0015380 Length:645 Species:Drosophila melanogaster
Sequence 2:XP_006251454.1 Gene:Fgfr3 / 84489 RGDID:620714 Length:803 Species:Rattus norvegicus


Alignment Length:582 Identity:157/582 - (26%)
Similarity:239/582 - (41%) Gaps:122/582 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   102 RIGDVPVEPQTWGIALKCSGTRNAEVTVTINVEVILDRATNNNTNLIFK-----RKKICLREEQD 161
            |||.:.:..|.|.:.:                |.::.....|.|.::..     |:...|...:.
  Rat   194 RIGGIKLRHQQWSLVM----------------ESVVPSDRGNYTCVVENKFGSIRQTYTLDVLER 242

  Fly   162 SAHEEYDDDDLDLLQTARKGHGGDIH---YVDRND-----EHVVANGHQAPEKQRPVVT------ 212
            |.|.......|...|||..|...:.|   |.|...     :||..||.:......|.||      
  Rat   243 SPHRPILQAGLPANQTAVLGSDVEFHCKVYSDAQPHIQWLKHVEVNGSKVGPDGTPYVTVLKSWI 307

  Fly   213 ----ESPVGRGNSGGSKRDFDPML--RENLV-------------PPA---------------SGL 243
                |:......:..|:||....|  ..|.:             |.|               :|:
  Rat   308 SENVEADARLRLANVSERDGGEYLCRATNFIGVAEKAFWLRVHGPQAAEEELMEVDEAGSVYAGV 372

  Fly   244 VTLIVGGILALVLVSTLILIAYCAKGPSKRHPSNGVHLIKTSSF----QRLPTISSTAHNS---- 300
            ::..||..| .:||...:.:......|.|...|..||  |.|.|    |::...|:::.||    
  Rat   373 LSYGVGFFL-FILVVAAVTLCRLRSPPKKGLGSPTVH--KVSRFPLKRQQVSLESNSSMNSNTPL 434

  Fly   301 --IYVCPSTITPTYATLTRPFREYEHEPEEFNRRLQELTVQKCRVRLSCLVQEGNFGRIYR---- 359
              |....|...|..|.::.  .|...:|:      .||:  :.|:.|...:.||.||::..    
  Rat   435 VRIARLSSGEGPVLANVSE--LELPADPK------WELS--RTRLTLGKPLGEGCFGQVVMAEAI 489

  Fly   360 GTYNDCQ----EVLVKTVAQHASQLQVNLLLQE-SMMLYEASHPNVLSVLGISIED---YATPFV 416
            |...|..    .|.||.:...|:...::.|:.| .||.....|.|::::||...:.   |.  .|
  Rat   490 GIDKDRTAKPVTVAVKMLKDDATDKDLSDLVSEMEMMKMIGKHKNIINLLGACTQGGPLYV--LV 552

  Fly   417 LYAATGSVRNLKSFLQ-------DPSY------ARSVTTIQTVLMGSQLAMAMEHLHNHGVIHKD 468
            .|||.|   ||:.||:       |.|:      ...:|....|....|:|..||:|.:...||:|
  Rat   553 EYAAKG---NLREFLRARRPPGMDYSFDACRLPEEQLTCKDLVSCAYQVARGMEYLASQKCIHRD 614

  Fly   469 IAARNCVIDDQLRVKLTDSALSRDLFPGDYNSLGDGEYRPIKWLSLEALQKSHYNEGSDVWSFGV 533
            :||||.::.:...:|:.|..|:||:...||.........|:||::.|||....|...||||||||
  Rat   615 LAARNVLVTEDNVMKIADFGLARDVHNLDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGV 679

  Fly   534 LMWEMCTLGKLPYAEIDPYEMEHYLKDGYRLAQPFNCPDELFTIMAYCWASMPAERPSFSQL 595
            |:||:.|||..||..|...|:...||:|:|:.:|.||..:|:.||..||.::|::||:|.||
  Rat   680 LLWEIFTLGGSPYPGIPVEELFKLLKEGHRMDKPANCTHDLYMIMRECWHAVPSQRPTFKQL 741

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
drlNP_001260566.1 WIF 21..157 CDD:128745 9/59 (15%)
PTK_Ryk 336..606 CDD:270639 97/285 (34%)
Fgfr3XP_006251454.1 IG_like 52..123 CDD:214653
Ig strand B 55..59 CDD:409358
Ig strand C 69..73 CDD:409358
Ig strand E 91..94 CDD:409358
Ig strand F 104..108 CDD:409358
IgI_2_FGFR 145..239 CDD:409443 10/60 (17%)
Ig strand A 145..148 CDD:409443
Ig strand A' 156..161 CDD:409443
Ig strand B 165..173 CDD:409443
Ig strand C 179..184 CDD:409443
Ig strand C' 187..189 CDD:409443
Ig strand D 198..201 CDD:409443 0/2 (0%)
Ig strand E 205..210 CDD:409443 1/20 (5%)
Ig strand F 219..226 CDD:409443 2/6 (33%)
Ig strand G 229..239 CDD:409443 2/9 (22%)
IgI_3_FGFR 247..347 CDD:409363 21/99 (21%)
Ig strand A 247..250 CDD:409363 0/2 (0%)
Ig strand A' 254..258 CDD:409363 0/3 (0%)
Ig strand B 266..273 CDD:409363 1/6 (17%)
Ig strand C 277..284 CDD:409363 0/6 (0%)
Ig strand D 299..304 CDD:409363 2/4 (50%)
Ig strand E 315..320 CDD:409363 0/4 (0%)
Ig strand F 328..336 CDD:409363 1/7 (14%)
Ig strand G 339..347 CDD:409363 0/7 (0%)
PTKc_FGFR3 456..789 CDD:173652 99/299 (33%)
Blue background indicates that the domain is not in the aligned region.

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