DRSC/TRiP Functional Genomics Resources

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Protein Alignment drl and tyro3

DIOPT Version :10

Sequence 1:NP_001260566.1 Gene:drl / 44355 FlyBaseID:FBgn0015380 Length:645 Species:Drosophila melanogaster
Sequence 2:XP_012824144.1 Gene:tyro3 / 780188 XenbaseID:XB-GENE-922144 Length:906 Species:Xenopus tropicalis


Alignment Length:593 Identity:148/593 - (24%)
Similarity:248/593 - (41%) Gaps:111/593 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   101 SRIGDVP--------VEPQT-WGIALKCSGTRNA---EVTVTINVEVILDRATNNNTNLIFKRKK 153
            ||:..||        ::|.| ..:.::|:....|   ...:|.|.:..:.:....|.::  .:..
 Frog   284 SRLTSVPPFAVVLDDLQPLTNHSVRVQCTNEMGASPFSEWITFNTKEKVPQLIPQNVHM--TKTD 346

  Fly   154 ICLR---EEQDSAHEEYDDDDLDLLQTARKGHGGDIHYVDRNDEHVVANGHQAPEKQRP--VVTE 213
            .||.   |:.|...|.|:.....:.........|:: :|..|..::.   ...|||...  :...
 Frog   347 SCLLLDWEDVDPDKEGYNILGFKVQWEQENTTQGEL-FVQENQANLT---KWNPEKDLTIRICIA 407

  Fly   214 SPVGRGN-----SGGSKRDF----DPMLRENLVPPASGLVTLIVGGILALVLVSTLILIAYCAKG 269
            :..|.|.     ..|||.:.    .|..|.:.||...|::|       |||.|..:.|| :..||
 Frog   408 NAAGCGPWSEFLLAGSKEEAGKQRHPHTRMSWVPMVLGILT-------ALVTVVAMTLI-FLRKG 464

  Fly   270 PSKRHPSN-----------GVHLIKTSSFQRL-PTISSTAHNSIYVCPSTITPTYATLTRPFREY 322
            ..:....|           .:......||.|. |.:.....:||.:                   
 Frog   465 RKETRFGNMLGSMLGRGGPVIQFTAARSFNRRGPEVMEATLDSIGI------------------- 510

  Fly   323 EHEPEEFNRRLQELTVQKCRVRLSCLVQEGNFGRIYRGTY----NDCQEVLVKTV-AQHASQLQV 382
               .:|...:|:::.:|:.:..|...:.:|.||.:.....    :..|:|.||.: |:......:
 Frog   511 ---SDELKSKLKDVLIQQQQFTLGRTLGKGEFGSVREAQLKMEDDTMQKVAVKMLKAEIFCSSDI 572

  Fly   383 NLLLQESMMLYEASHPNVLSVLGISIED-----YATPFVL--YAATGSVRN--LKSFLQDPSYAR 438
            ...|:|:..:.|..||||..::|:|:..     ...|.|:  :...|.:..  |.|.:.:...|.
 Frog   573 EEFLREAAFMKEFDHPNVCKLIGVSLRSRTKGRLPVPMVILPFMKHGDLHTFLLMSRIGEEPIAL 637

  Fly   439 SVTTIQTVLMGSQLAMAMEHLHNHGVIHKDIAARNCVIDDQLRVKLTDSALSRDLFPGDYNSLGD 503
            .:.|:...::  .:...||:|.:...||:|:|.|||::::.:.|.:.|..||:.::.|||...|.
 Frog   638 PIQTLVRFMI--DICSGMEYLSSKNFIHRDLATRNCMLNEDMTVCVADFGLSKKIYSGDYYRQGC 700

  Fly   504 GEYRPIKWLSLEALQKSHYNEGSDVWSFGVLMWEMCTLGKLPYAEIDPYEMEHYLKDGYRLAQPF 568
            ....|:|||:||:|..:.|...||||:|||.:||:.|.|:.|||.::..|:..||..|.||.||.
 Frog   701 ASKLPVKWLALESLADNVYTVHSDVWAFGVTLWEIVTRGQTPYAGVENSEIYSYLTAGNRLKQPP 765

  Fly   569 NCPDELFTIMAYCWASMPAERPSFSQLQ----------ICLSEFHTQITRYV-------XPAVLK 616
            :|.|||:.:|..||.:.|..||||..|:          ..||..|.|:  ||        .|.:.
 Frog   766 DCLDELYEMMCQCWITEPKRRPSFVDLKRRLEAIWGRLSILSASHDQL--YVNLGETCGAAAAVS 828

  Fly   617 --HAKTCK 622
              |:..||
 Frog   829 GLHSAFCK 836

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
drlNP_001260566.1 WIF 21..157 CDD:128745 12/67 (18%)
PTK_Ryk 336..606 CDD:270639 90/293 (31%)
tyro3XP_012824144.1 Ig 38..122 CDD:472250
Ig strand B 46..50 CDD:409353
Ig strand C 59..63 CDD:409353
Ig strand E 86..90 CDD:409353
Ig strand F 100..105 CDD:409353
Ig strand G 114..117 CDD:409353
IgI_2_Axl_Tyro3_like 126..206 CDD:409407
Ig strand A 126..129 CDD:409407
Ig strand A' 132..136 CDD:409407
Ig strand B 140..149 CDD:409407
Ig strand C 154..161 CDD:409407
Ig strand C' 163..166 CDD:409407
Ig strand E 170..181 CDD:409407
Ig strand F 184..193 CDD:409407
Ig strand G 197..206 CDD:409407
FN3 211..328 CDD:238020 9/43 (21%)
fn3 337..416 CDD:394996 15/84 (18%)
PTKc_Tyro3 518..801 CDD:270659 88/284 (31%)
Blue background indicates that the domain is not in the aligned region.

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