DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment drl and ryk

DIOPT Version :10

Sequence 1:NP_001260566.1 Gene:drl / 44355 FlyBaseID:FBgn0015380 Length:645 Species:Drosophila melanogaster
Sequence 2:XP_005165988.1 Gene:ryk / 558502 ZFINID:ZDB-GENE-070209-277 Length:632 Species:Danio rerio


Alignment Length:663 Identity:222/663 - (33%)
Similarity:329/663 - (49%) Gaps:119/663 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 IGLLLTLIASG-----------------QAHLNIFLNLHEVLRLIGVSAELYYVREGAINDYALN 55
            :|..|.|:..|                 :.::|||::..||.:|:|:.|||||||:..:|.|||:
Zfish    29 VGFFLLLLLEGARCLANPSNSPGINNNNRPNVNIFMSEEEVKKLLGLDAELYYVRDDVVNHYALS 93

  Fly    56 FAVPVPANISDVTFTWQSLVDHPLPYSINIATSDTEVLPRPILNISRIGDVPVEPQTWGIALKCS 120
            |.:|||::.:.:.|||.|  ...:.|.:.....:|..:.:|..|||..|:||.....:.:.|.||
Zfish    94 FVLPVPSDTNSLHFTWHS--SSKVDYRLGFHVENTSAMDQPQSNISVQGEVPRTRSVFRVDLFCS 156

  Fly   121 GTRNAEVTVTINVEVILDRATNNNTNLIFKRKKICLRE-EQDSAHEEYDDDDLDLLQTARKGHGG 184
            |..:.|..:|:.:.:   ....|.|.|.|||:|:|.|. ||....:                   
Zfish   157 GKADGEAVLTVQLNL---STAANFTVLNFKRRKMCYRRIEQPEPPK------------------- 199

  Fly   185 DIHYVDRNDEHVVANGHQAPEKQRPVVTESPVGRGNSGGSKRDFDPMLRENLVPPASGLVTLIVG 249
            .:.:.:...:.:.|:...||..                 |.|.|          ..|..|..||.
Zfish   200 TLPFPNTTIQRIDASSPNAPTT-----------------STRVF----------YISVCVCCIVI 237

  Fly   250 GILALVLVSTLILIAYCAK------GPSKRHPSNGVHLIKTSSFQRLPTISSTAHNSIYVC---- 304
            .::|::|.   :|..:..|      ..|....|.|:....|.:.|.|.  :.|.:|:..|.    
Zfish   238 FLVAIILA---VLHLHSMKRVEMDDSVSDSGSSQGLSQPSTQTTQYLR--ADTPNNATPVTNAQT 297

  Fly   305 -------------PSTITPTYATLTRPFREYEHEP------EEFNRRLQELTVQKCRVRLSCLVQ 350
                         |....|::.|.:.|....|...      .|...:::::.:.:.||.|..::.
Zfish   298 GSAPMLQLAGASFPHPGAPSHETKSYPSLRIEKNDLRSVTLLEAKAKVKDIAISRERVTLRDVLH 362

  Fly   351 EGNFGRIYRGTYND------CQEVLVKTVAQHASQLQVNLLLQESMMLYEASHPNVLSVLGISIE 409
            ||.||||:.|...|      .::|.||.|..|||::||.::|.||..|....|.|:|.:..:.||
Zfish   363 EGTFGRIFHGVLLDEKDPSKEKQVFVKAVKDHASEVQVTMMLTESCKLRGLHHRNLLPISHVCIE 427

  Fly   410 DYATPFVL--YAATGSVRNLKSFLQDPSYA-----RSVTTIQTVLMGSQLAMAMEHLHNHGVIHK 467
            |...|.||  |...|   |||.||:....|     ::::....|.|..|::..|.:|....||||
Zfish   428 DGEKPMVLLPYMNWG---NLKLFLRQCKLAEANNPQAISQQDLVHMAIQISCGMSYLARREVIHK 489

  Fly   468 DIAARNCVIDDQLRVKLTDSALSRDLFPGDYNSLGDGEYRPIKWLSLEALQKSHYNEGSDVWSFG 532
            |:||||||||:.::||:||:||:|||||.||:.|||.|.||::|::||:|..:.::..||||:||
Zfish   490 DLAARNCVIDNSMQVKITDNALARDLFPMDYHCLGDNENRPVRWMALESLLNNDFSSASDVWAFG 554

  Fly   533 VLMWEMCTLGKLPYAEIDPYEMEHYLKDGYRLAQPFNCPDELFTIMAYCWASMPAERPSFSQLQI 597
            |.:||:.|||:.||.:|||:||..|||||||:|||.|||||||.:||.|||..|.|||.|.||..
Zfish   555 VTLWELMTLGQTPYVDIDPFEMAAYLKDGYRIAQPINCPDELFAVMACCWALDPEERPKFQQLVQ 619

  Fly   598 CLSEFHTQITRYV 610
            ||:|||..:..||
Zfish   620 CLTEFHAALGAYV 632

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
drlNP_001260566.1 WIF 21..157 CDD:128745 49/135 (36%)
PTK_Ryk 336..606 CDD:270639 135/282 (48%)
rykXP_005165988.1 WIF 63..184 CDD:460414 43/125 (34%)
PTK_Ryk 348..628 CDD:270639 135/282 (48%)

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