DRSC/TRiP Functional Genomics Resources

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Protein Alignment drl and Eph

DIOPT Version :9

Sequence 1:NP_001260566.1 Gene:drl / 44355 FlyBaseID:FBgn0015380 Length:645 Species:Drosophila melanogaster
Sequence 2:NP_524625.3 Gene:Eph / 43803 FlyBaseID:FBgn0025936 Length:1096 Species:Drosophila melanogaster


Alignment Length:633 Identity:140/633 - (22%)
Similarity:246/633 - (38%) Gaps:166/633 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 LIASGQAHLNIFLNLHEVLRLIGVSAELYYVREGAINDYALNFAVPVPANISDVTFTWQSLV--D 76
            ::.|..:.|||.|:|:||..   ..||:.:..|..:.....|..:....| .|....|...|  |
  Fly   498 IVFSNTSLLNIPLDLNEVKT---GQAEIVFTTESVLLSTVFNLRILAITN-KDADLEWDKPVQSD 558

  Fly    77 HPLPY------------SINIATSDTEVLPRPILNISRIGDVPVEPQTWGIALKCSGTRNAEVTV 129
            .||.:            :||.:..:|:.....|:.:       :|...:|..::|.         
  Fly   559 FPLEFYEVRWFPKVELDAINKSALNTKETKAHIVGL-------LENTEYGFQVRCK--------- 607

  Fly   130 TINVEVILDRATNNN----TNLIFKRKKICLREEQDSAHEEYDDDDLDLLQTARKGHGGDIHYVD 190
                       |||.    :|:|:       .:...|....|||             ...|.:: 
  Fly   608 -----------TNNGFGSYSNMIY-------AQTLQSVGSVYDD-------------SVQIRFI- 640

  Fly   191 RNDEHVVANGHQAPEKQRPVVTESPVGRGNSGGSKRDFDPMLRENLVPPASGLVTLIVGGILALV 255
                                                             |..:||    |:|.||
  Fly   641 -------------------------------------------------AGAIVT----GVLFLV 652

  Fly   256 LVSTLILIAYCAKGPSKRHPSNGVHLIKTSSFQRLPTISSTAHNSIYVCPST--ITPTYATLTRP 318
            :.  :|...|..:   .:|..:    :...|...||.....|.|.:....:|  :...:..:|.|
  Fly   653 IF--IIATVYFMR---SKHQDD----LDKKSTNHLPLPLDYASNEVNSMDTTPIVKKLHLNVTTP 708

  Fly   319 F----REY--EHEPEEFNRRLQELT--VQKCRVRLSCLVQEGNFGRIYRGTY----NDCQ--EVL 369
            .    |.|  .|..|:.|:.::|..  :....:.:..::..|.||.:.||..    |..|  :|.
  Fly   709 LFGNSRSYVDPHTYEDPNQAIREFAREIDANYITIEAIIGGGEFGDVCRGRLKIPPNFVQDIDVA 773

  Fly   370 VKTVAQHASQLQVNLLLQESMMLYEASHPNVLSVLGISIEDYATPFVL---YAATGSVRNLKSFL 431
            :||:...:|:......|.|:.::.:..||||:.:.|:...  :.|.::   |...||   |.:||
  Fly   774 IKTLKPGSSEKARCDFLTEASIMGQFDHPNVIYLQGVVTR--SNPVMIITEYMENGS---LDTFL 833

  Fly   432 Q--DPSYARSVTTIQTVLMGSQLAMAMEHLHNHGVIHKDIAARNCVIDDQLRVKLTDSALSRDLF 494
            :  |..:    .|:|.::|...:|..|.:|.:...:|:|:||||.:::.||..|:.|..|||::.
  Fly   834 RVNDGKF----QTLQLIVMLRGIASGMSYLSDMNYVHRDLAARNVLVNAQLICKIADFGLSREIE 894

  Fly   495 PGD--YNSLGDGEYRPIKWLSLEALQKSHYNEGSDVWSFGVLMWEMCTLGKLPYAEIDPYEMEHY 557
            ...  |.:.| |:. |::|.:.||:....:...|||||:||::||:.:.|:.||......::...
  Fly   895 NASDAYTTRG-GKI-PVRWTAPEAIAFRKFTSASDVWSYGVVLWEVMSYGERPYWNWSNQDVIKS 957

  Fly   558 LKDGYRLAQPFNCPDELFTIMAYCWASMPAERPSFSQLQICLSEFHTQ 605
            ::.||||..|.:||:.|:.:|..||......||:|:.:...|.....|
  Fly   958 IEKGYRLPAPMDCPEALYQLMLDCWQKQRTHRPTFASIVSTLDNLARQ 1005

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
drlNP_001260566.1 WIF 21..157 CDD:128745 30/153 (20%)
PTK_Ryk 336..606 CDD:270639 80/285 (28%)
Pkinase_Tyr 343..599 CDD:285015 78/268 (29%)
EphNP_524625.3 EphR_LBD 85..260 CDD:198439
FN3 387..476 CDD:238020
FN3 536..623 CDD:238020 20/121 (17%)
EphA2_TM 644..736 CDD:291255 23/104 (22%)
PTKc_EphR 736..1002 CDD:270629 79/276 (29%)
Pkinase_Tyr 741..999 CDD:285015 78/268 (29%)
SAM_1 1033..1092 CDD:278937
SAM 1039..1092 CDD:197735
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45455343
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24416
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.940

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