DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment drl and htl

DIOPT Version :9

Sequence 1:NP_001260566.1 Gene:drl / 44355 FlyBaseID:FBgn0015380 Length:645 Species:Drosophila melanogaster
Sequence 2:NP_524394.2 Gene:htl / 42160 FlyBaseID:FBgn0010389 Length:729 Species:Drosophila melanogaster


Alignment Length:670 Identity:157/670 - (23%)
Similarity:257/670 - (38%) Gaps:186/670 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 GLLLTLIASGQAHLNIFLNLHEVLRLIGVSAELYYVREGAI-----------NDYALNFAVPVPA 62
            |.|||            ||.|   .|......:.:.|.|.:           |.:.|.....||.
  Fly   118 GSLLT------------LNCH---ALGNPEPNITWYRNGTVDWTRGYGSLKRNRWTLTMEDLVPG 167

  Fly    63 NISDVTFTWQSLVDHPLPYSINIATSDTEVL------PRPI-----LNISRI------------G 104
            :..:.|.        .:..|:.....||:|:      .:||     ||::.:            .
  Fly   168 DCGNYTC--------KVCNSLGCIRHDTQVIVSDRVNHKPILMTGPLNLTLVVNSTGSMHCKYLS 224

  Fly   105 DVPVEPQTWGIALKCSGTRNAEVTVTINVEVILDRATNNNTNLIFKRKK----ICLREEQDSAHE 165
            |: ...:.| |.:.|.|..|.                :||.::|.:.|.    :.:|.||:..:.
  Fly   225 DL-TSKKAW-IFVPCHGMTNC----------------SNNRSIIAEDKDQLDFVNVRMEQEGWYT 271

  Fly   166 EYDDDDLDLLQTARKGHGGDIHYVDRNDEHVVANGHQAPEKQRPVVTESPVGRGNSGGSKRDFDP 230
            ..:.:.|        |......|:     .||.:.|         |.|:.|..|:          
  Fly   272 CVESNSL--------GQSNSTAYL-----RVVRSLH---------VLEAGVASGS---------- 304

  Fly   231 MLRENLVPPASGLVTLIVGGILALVLVSTLILIAYCAKGPSKRHPSNGVHLIKTSSFQRLPTISS 295
                  :...|.:...:.||::.:.:  |.:.:.|..:  ..:|..    ::|    ||:.|:..
  Fly   305 ------LHSTSFVYIFVFGGLIFIFM--TTLFVFYAIR--KMKHEK----VLK----QRIETVHQ 351

  Fly   296 TAHNSIYVCP-----------STITPTY------ATLTR------PFREYEHEPEEFNRRLQELT 337
            .....|...|           :.|.|..      .|:.:      ||.|||. |.:.|..|    
  Fly   352 WTKKVIIFKPEGGGDSSGSMDTMIMPVVRIQKQRTTVLQNGNEPAPFNEYEF-PLDSNWEL---- 411

  Fly   338 VQKCRVRLSCLVQEGNFGRIYRGTYNDCQEVLVKTVAQ-HASQLQVNLLLQESMMLYEASHPNVL 401
             .:..:.|...:.||.|||:.....|:. .|.||.|.: |......:|:.:..:|.....|.|::
  Fly   412 -PRSHLVLGATLGEGAFGRVVMAEVNNA-IVAVKMVKEGHTDDDIASLVREMEVMKIIGRHINII 474

  Fly   402 SVLGISIED---YATPFVLYAATGSVRNLKSFL---------QD-------PS-YARSVTTIQTV 446
            ::||...::   |.  .|.||..|   |||.||         ||       || .|..:|....:
  Fly   475 NLLGCCSQNGPLYV--IVEYAPHG---NLKDFLYKNRPFGRDQDRDSSQPPPSPPAHVITEKDLI 534

  Fly   447 LMGSQLAMAMEHLHNHGVIHKDIAARNCVIDDQLRVKLTDSALSRDLFPGDYNSLGDGEYRPIKW 511
            ....|:|..|::|.:...||:|:||||.::.|...:|:.|..|:||:...||.........||||
  Fly   535 KFAHQIARGMDYLASRRCIHRDLAARNVLVSDDYVLKIADFGLARDIQSTDYYRKNTNGRLPIKW 599

  Fly   512 LSLEALQKSHYNEGSDVWSFGVLMWEMCTLGKLPYAEI-DPYEMEHYLKDGYRLAQPFNCPDELF 575
            ::.|:||:..|:..|||||:|:|:||:.|.|:.||..| ...|:..||..|.|:.:|..|...::
  Fly   600 MAPESLQEKFYDSKSDVWSYGILLWEIMTYGQQPYPTIMSAEELYTYLMSGQRMEKPAKCSMNIY 664

  Fly   576 TIMAYCWASMPAERPSFSQL 595
            .:|..||.....:||.|:::
  Fly   665 ILMRQCWHFNADDRPPFTEI 684

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
drlNP_001260566.1 WIF 21..157 CDD:128745 29/173 (17%)
PTK_Ryk 336..606 CDD:270639 88/282 (31%)
Pkinase_Tyr 343..599 CDD:285015 88/275 (32%)
htlNP_524394.2 Ig 112..191 CDD:299845 19/95 (20%)
IG_like 113..191 CDD:214653 19/95 (20%)
IG_like 205..289 CDD:214653 18/114 (16%)
PKc_like 404..692 CDD:304357 91/292 (31%)
STYKc 416..688 CDD:214568 88/275 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45455249
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24416
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.940

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