DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment drl and Egfr

DIOPT Version :10

Sequence 1:NP_001260566.1 Gene:drl / 44355 FlyBaseID:FBgn0015380 Length:645 Species:Drosophila melanogaster
Sequence 2:NP_476759.1 Gene:Egfr / 37455 FlyBaseID:FBgn0003731 Length:1426 Species:Drosophila melanogaster


Alignment Length:613 Identity:130/613 - (21%)
Similarity:225/613 - (36%) Gaps:142/613 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   119 CSGTRNAEVTVTINVEVILDRATNNNTNLIFKRKKICLREEQ--DSAHEEY----DDDDLDLL-- 175
            |.|....:.|:.|......:.|..||...:   |:..|::::  |....||    :...|..|  
  Fly   672 CDGCTGPKDTIGIGACTTCNLAIINNDATV---KRCLLKDDKCPDGYFWEYVHPQEQGSLKPLAG 733

  Fly   176 -QTARKGH----------------GGDIHYVDRND-EHVVANGHQAPEKQRPVVTESPVGRGNSG 222
             ...||.|                ....||..|.. |......|...|:||......|...|.:|
  Fly   734 RAVCRKCHPLCELCTNYGYHEQVCSKCTHYKRREQCETECPADHYTDEEQRECFQCHPECNGCTG 798

  Fly   223 GSKRD---------FD-----PMLRENLV---------------------------PPASGLVT- 245
            ....|         ||     |.:...:.                           ||.|..:| 
  Fly   799 PGADDCKSCRNFKLFDANETGPYVNSTMFNCTSKCPLEMRHVNYQYTAIGPYCAASPPRSSKITA 863

  Fly   246 -------LIVGGILALVLVSTLILIAYCAKGPSKRHPSNGVHLIKTSSFQRLPTISSTAHNSIYV 303
                   .|:.|.:.:..:..|.::.|..:...|               .:..|:..|.  ::..
  Fly   864 NLDVNMIFIITGAVLVPTICILCVVTYICRQKQK---------------AKKETVKMTM--ALSG 911

  Fly   304 CPSTITPTYATLTRPFREYEHEPEEFNRRLQELTVQK-CRVRLSCLVQEGNFGRIYRGTYND--- 364
            |..         :.|.|     |......|.:|.:.| ..:|...::..|.|||:|:|.:..   
  Fly   912 CED---------SEPLR-----PSNIGANLCKLRIVKDAELRKGGVLGMGAFGRVYKGVWVPEGE 962

  Fly   365 -------CQEVLVKTVAQHASQLQVNLLLQESMMLYEASHPNVLSVLGISIEDYATPFVLYAATG 422
                   .:|:|..|.|:.:.:     .|:|:.::....|.|:|.:|.:.:.............|
  Fly   963 NVKIPVAIKELLKSTGAESSEE-----FLREAYIMASVEHVNLLKLLAVCMSSQMMLITQLMPLG 1022

  Fly   423 SVRNLKSFLQDPSYARSVTTIQTVLMGSQLAMAMEHLHNHGVIHKDIAARNCVIDDQLRVKLTDS 487
            .:.:.....:|...::::....|     |:|..|.:|....::|:|:||||.::.....||:||.
  Fly  1023 CLLDYVRNNRDKIGSKALLNWST-----QIAKGMSYLEEKRLVHRDLAARNVLVQTPSLVKITDF 1082

  Fly   488 ALSRDLFPGDYNSLGDGEYR------PIKWLSLEALQKSHYNEGSDVWSFGVLMWEMCTLGKLPY 546
            .|:: |...|.|     ||:      |||||:||.::...:...||||:|||.:||:.|.|:.|:
  Fly  1083 GLAK-LLSSDSN-----EYKAAGGKMPIKWLALECIRNRVFTSKSDVWAFGVTIWELLTFGQRPH 1141

  Fly   547 AEIDPYEMEHYLKDGYRLAQPFNCPDELFTIMAYCWASMPAERPSFSQLQICLSEFHTQITRYVX 611
            ..|...::...::.|.:|.||..|..:::..:..||....|.||:|.||....:||.....||: 
  Fly  1142 ENIPAKDIPDLIEVGLKLEQPEICSLDIYCTLLSCWHLDAAMRPTFKQLTTVFAEFARDPGRYLA 1206

  Fly   612 PAVLKHAKTCKYNKRRRRKIFQQTTSST 639
            ....|..:...|..:..:.:.::...:|
  Fly  1207 IPGDKFTRLPAYTSQDEKDLIRKLAPTT 1234

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
drlNP_001260566.1 WIF 21..157 CDD:128745 8/37 (22%)
PTK_Ryk 336..606 CDD:270639 77/286 (27%)
EgfrNP_476759.1 Recep_L_domain 128..239 CDD:460032
Furin-like 253..401 CDD:395614
Recep_L_domain 419..547 CDD:460032
GF_recep_IV 572..684 CDD:464344 3/11 (27%)
FU 662..716 CDD:214589 10/46 (22%)
GF_recep_IV 740..>834 CDD:464344 16/93 (17%)
PTKc_EGFR_like 930..1208 CDD:270648 79/293 (27%)
Blue background indicates that the domain is not in the aligned region.

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