DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment drl and Tyro3

DIOPT Version :10

Sequence 1:NP_001260566.1 Gene:drl / 44355 FlyBaseID:FBgn0015380 Length:645 Species:Drosophila melanogaster
Sequence 2:NP_058788.1 Gene:Tyro3 / 25232 RGDID:3923 Length:880 Species:Rattus norvegicus


Alignment Length:597 Identity:154/597 - (25%)
Similarity:256/597 - (42%) Gaps:155/597 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    53 ALNFAVPV-------PANISD-VTFTWQSLVDHPLPYSINIATSDT-------EVLPR-PILNIS 101
            |.|:::.|       |:...| |.|..:.|.....|.:.:...:|:       ||:|. |     
  Rat   281 ATNYSLRVRCANALGPSPYGDWVPFQTKGLAPARAPQNFHAIRTDSGLILEWEEVIPEDP----- 340

  Fly   102 RIGDVPVEPQ--TWGIALKCSGTRNAEVTVTINVEVILDRATNNNTNLIFKRKKICLREEQDSAH 164
              |:.|:.|.  :|   ::.:||::         |::::..|.|.|:.                 
  Rat   341 --GEGPLGPYKLSW---VQENGTQD---------ELMVEGTTANLTDW----------------- 374

  Fly   165 EEYDDDDLDL-LQTARKGHGGDIHYVDRNDEHVVANGHQAPEKQRPVVTESPVGRGNSGGSKRDF 228
                |...|| |:.......||                 .|..| |:|..|....|..|      
  Rat   375 ----DPQKDLVLRVCASNAIGD-----------------GPWSQ-PLVVSSHDHAGRQG------ 411

  Fly   229 DPMLRENLVPPASGLVT-LIVGGILALVLV-----STLILIAY---CAKGPSKRHPSNGVHLIKT 284
            .|..|.:.||...|::| ||....|||:|:     .|....|:   .|:|    .|:  ||....
  Rat   412 PPHSRTSWVPVVLGVLTALITAAALALILLRKRRKETRFGQAFDSVMARG----EPA--VHFRAA 470

  Fly   285 SSFQRLPTISSTAHNSIYVCPSTITPTYATLTRPFREYEHEPEEFNRRLQELTVQKCRVRLSCLV 349
            .||.|             ..|..|..|..:|        ...:|...:|:::.:.:.:..|..::
  Rat   471 RSFNR-------------ERPERIEATLDSL--------GISDELKEKLEDVLIPEQQFTLGRML 514

  Fly   350 QEGNFGRIYR-------GTYNDCQEVLVKTV-AQHASQLQVNLLLQESMMLYEASHPNVLSVLGI 406
            .:|.||.:..       |::   .:|.||.: |...:...:...|:|:..:.|..||:|..::|:
  Rat   515 GKGEFGSVREAQLKQEDGSF---VKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKLVGV 576

  Fly   407 SIEDYA----------TPFVLYAATGSVRNLKSFL------QDPSYARSVTTIQTVLMGSQLAMA 455
            |:...|          .||:.:.      :|.:||      ::|......|.::.::   .:|..
  Rat   577 SLRSRAKGRLPIPMVILPFMKHG------DLHAFLLASRIGENPFNLPLQTLVRFMV---DIACG 632

  Fly   456 MEHLHNHGVIHKDIAARNCVIDDQLRVKLTDSALSRDLFPGDYNSLGDGEYRPIKWLSLEALQKS 520
            ||:|.:...||:|:|||||::.:.:.|.:.|..|||.::.|||...|.....|:|||:||:|..:
  Rat   633 MEYLSSRNFIHRDLAARNCMLAEDMTVCVADFGLSRKIYSGDYYRQGCASKLPVKWLALESLADN 697

  Fly   521 HYNEGSDVWSFGVLMWEMCTLGKLPYAEIDPYEMEHYLKDGYRLAQPFNCPDELFTIMAYCWASM 585
            .|...||||:|||.|||:.|.|:.|||.|:..|:.:||..|.||.||..|.:|::.:|..||::.
  Rat   698 LYTVHSDVWAFGVTMWEIMTRGQTPYAGIENAEIYNYLISGNRLKQPPECMEEVYDLMYQCWSAD 762

  Fly   586 PAERPSFSQLQI 597
            |.:||||:.|::
  Rat   763 PKQRPSFTCLRM 774

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
drlNP_001260566.1 WIF 21..157 CDD:128745 24/121 (20%)
PTK_Ryk 336..606 CDD:270639 89/286 (31%)
Tyro3NP_058788.1 Ig 40..126 CDD:472250
Ig strand B 50..54 CDD:409553
Ig strand C 63..67 CDD:409553
Ig strand E 90..94 CDD:409553
Ig strand F 104..109 CDD:409553
Ig strand G 118..121 CDD:409553
IgI_2_Axl_Tyro3_like 130..209 CDD:409407
Ig strand A 130..133 CDD:409407
Ig strand A' 136..140 CDD:409407
Ig strand B 144..153 CDD:409407
Ig strand C 158..165 CDD:409407
Ig strand C' 167..170 CDD:409407
Ig strand E 174..185 CDD:409407
Ig strand F 188..197 CDD:409407
Ig strand G 201..209 CDD:409407
FN3 215..307 CDD:238020 7/25 (28%)
fn3 315..396 CDD:394996 23/137 (17%)
PTKc_Tyro3 498..781 CDD:270659 90/289 (31%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 804..827
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 842..864
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.