DRSC/TRiP Functional Genomics Resources

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Protein Alignment drl and Ryk

DIOPT Version :9

Sequence 1:NP_001260566.1 Gene:drl / 44355 FlyBaseID:FBgn0015380 Length:645 Species:Drosophila melanogaster
Sequence 2:NP_038677.3 Gene:Ryk / 20187 MGIID:101766 Length:594 Species:Mus musculus


Alignment Length:645 Identity:217/645 - (33%)
Similarity:335/645 - (51%) Gaps:106/645 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 PNLLTIGLLLTLI------------ASGQAHLNIFLNLHEVLRLIGVSAELYYVREGAINDYALN 55
            |.||.  |||.::            |.....::::|:..||.||:|:.|||||||...|:.|||:
Mouse    19 PPLLL--LLLAMLPAAAPRSPALAAAPAGPSVSLYLSEDEVRRLLGLDAELYYVRNDLISHYALS 81

  Fly    56 FAVPVPANISDVTFTW--QSLVDHPLPYSINIATSDTEVLPRPILNISRIGDVPVEPQTWGIALK 118
            |.:.||:..:.:.|||  :|.|::.|.:.::    :...:..|.:|||..|:||.....:.:.|.
Mouse    82 FNLLVPSETNFLHFTWHAKSKVEYKLGFQVD----NFVAMGMPQVNISAQGEVPRTLSVFRVELS 142

  Fly   119 CSGTRNAEVTVTINVEVILDRATNNNTNLIFKRKKICLREEQDSAHEEYDDDDLDLLQTARKGHG 183
            |:|..::||.:.:.:.:.:: ::.|.|.|.|||:|:|.::             |:.::|:.    
Mouse   143 CTGKVDSEVMILMQLNLTVN-SSKNFTVLNFKRRKMCYKK-------------LEEVKTSA---- 189

  Fly   184 GDIHYVDRNDEHVVANGHQAPEKQRPVVTESPVGRGNSGGSKRDFDPMLRENLVPPASGLVTLIV 248
                 :|:|....:                              :||:   :..|..|..|..|.
Mouse   190 -----LDKNTSRTI------------------------------YDPV---HAAPTTSTRVFYIS 216

  Fly   249 GGILALVLVSTLILIAYCAKGPSKR----------HPSNGVHLIKTSSFQRLPTISSTAHNSIYV 303
            .|:...|:....|::|.......||          ..|.|:....|.:.|.|.  :.|.:|:..:
Mouse   217 VGVCCAVIFLVAIILAVLHLHSMKRIELDDSISASSSSQGLSQPSTQTTQYLR--ADTPNNATPI 279

  Fly   304 CPSTITPTYATLTRPFREYEHEPEEFNRRLQELTVQKCRVRLSCLVQEGNFGRIYRGTY------ 362
            ..|:..||........|..  ...|...:::::.:.:.|:.|..::|||.||||:.|..      
Mouse   280 TSSSGYPTLRIEKNDLRSV--TLLEAKAKVKDIAISRERITLKDVLQEGTFGRIFHGILVDEKDP 342

  Fly   363 NDCQEVLVKTVAQHASQLQVNLLLQESMMLYEASHPNVLSVLGISIEDYATPFVL--YAATGSVR 425
            |..::..||||...||::||.::|.||..|....|.|:|.:..:.||:...|.|:  |...|   
Mouse   343 NKEKQTFVKTVKDQASEVQVTMMLTESCKLRGLHHRNLLPITHVCIEEGEKPMVVLPYMNWG--- 404

  Fly   426 NLKSFLQ-----DPSYARSVTTIQTVLMGSQLAMAMEHLHNHGVIHKDIAARNCVIDDQLRVKLT 485
            |||.||:     :.:..::::....|.|..|:|..|.:|....|||:|:|||||||||.|:||:|
Mouse   405 NLKLFLRQCKLVEANNPQAISQQDLVHMAIQIACGMSYLARREVIHRDLAARNCVIDDTLQVKIT 469

  Fly   486 DSALSRDLFPGDYNSLGDGEYRPIKWLSLEALQKSHYNEGSDVWSFGVLMWEMCTLGKLPYAEID 550
            |:||||||||.||:.|||.|.||::|::||:|..:.::..||||:|||.:||:.|||:.||.:||
Mouse   470 DNALSRDLFPMDYHCLGDNENRPVRWMALESLVNNEFSSASDVWAFGVTLWELMTLGQTPYVDID 534

  Fly   551 PYEMEHYLKDGYRLAQPFNCPDELFTIMAYCWASMPAERPSFSQLQICLSEFHTQITRYV 610
            |:||..|||||||:|||.|||||||.:||.|||..|.|||.|.||..||:|||..:..||
Mouse   535 PFEMAAYLKDGYRIAQPINCPDELFAVMACCWALDPEERPKFQQLVQCLTEFHAALGAYV 594

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
drlNP_001260566.1 WIF 21..157 CDD:128745 46/137 (34%)
PTK_Ryk 336..606 CDD:270639 134/282 (48%)
Pkinase_Tyr 343..599 CDD:285015 128/268 (48%)
RykNP_038677.3 WIF 47..180 CDD:128745 46/137 (34%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 250..283 7/34 (21%)
PTK_Ryk 310..590 CDD:270639 134/282 (48%)
Pkinase_Tyr 317..583 CDD:285015 128/268 (48%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 269 1.000 Domainoid score I1833
eggNOG 1 0.900 - - E1_KOG1025
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 361 1.000 Inparanoid score I2184
Isobase 1 0.950 - 0 Normalized mean entropy S3376
OMA 1 1.010 - - QHG45854
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0005256
OrthoInspector 1 1.000 - - otm43395
orthoMCL 1 0.900 - - OOG6_106190
Panther 1 1.100 - - O PTHR24416
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3316
SonicParanoid 1 1.000 - - X3777
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1514.810

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