DRSC/TRiP Functional Genomics Resources

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Protein Alignment drl and lin-18

DIOPT Version :9

Sequence 1:NP_001260566.1 Gene:drl / 44355 FlyBaseID:FBgn0015380 Length:645 Species:Drosophila melanogaster
Sequence 2:NP_508684.4 Gene:lin-18 / 180679 WormBaseID:WBGene00003007 Length:583 Species:Caenorhabditis elegans


Alignment Length:658 Identity:190/658 - (28%)
Similarity:299/658 - (45%) Gaps:159/658 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 AHLNIFLNLHEVLRLIGVSAELYYVREGAINDYALNFAVPVPANISDVTFTWQSL-VDHPLPYSI 83
            |::|:|::..|:.|..||.|||.|:..|.::.|:..|...|.|||..::|||.:: :.|   |.:
 Worm    18 ANVNMFISKEEMNRTFGVKAELNYIEMGNVSSYSTKFHYRVMANIDYLSFTWNAVGIVH---YEV 79

  Fly    84 NIATSDTEVLPRPILNISRIGDVPVEPQTWGIALKCSGTRNAEVTVTI-------NVEVILDRAT 141
            .:.:.|:.||  ||:.|...|.||...|.:.:..:|:|.|:.:..|::       |.|.:     
 Worm    80 YVESDDSSVL--PIVRIPLKGTVPESLQDFTVEYRCAGHRSGQFAVSLYFTFKYGNKEPL----- 137

  Fly   142 NNNTNLIFKRKKICL----REEQDSAHEEYDDDDLD-----------------LLQTARKGHGGD 185
                .:..:::|||.    |...:..:|.::.||.|                 |:..|..     
 Worm   138 ----KVKLRQEKICASRDGRRGLNGGYEGHEVDDTDSIDKAFFVIICIAAAFLLIVAATL----- 193

  Fly   186 IHYVDRNDEHVVANGHQAPEKQRPVVTESPVGRGNSGGSKRDFDPMLRENLVPPASGLVTLIVGG 250
            |.|..|:            :|:..:.|..|....||..|.:...|.|   |..|..|..||    
 Worm   194 ICYFKRS------------KKEDMIPTRLPTSFRNSLKSTKSAQPFL---LSTPRDGPPTL---- 239

  Fly   251 ILALVLVSTLILIAYCAKGPSKRHPSNGVHLIKTSSFQRLPTISSTAHNSIYVCPSTITPTYATL 315
                    :.|..|.|:.                         ||.:.|||  .||  .|....:
 Worm   240 --------SAISSAPCSS-------------------------SSASGNSI--IPS--KPRNIDV 267

  Fly   316 TRPFREYEHEPEEFNRRLQELTVQKCRVRLSCLVQEGNFGRIYRGTYNDCQEVL----------- 369
            .|...:...:.:.|    |.|.          |..||.||.:....:....:||           
 Worm   268 RRALLQLYQDRDAF----QSLP----------LDMEGTFGEVRYAIWRQVDDVLNGDVDDEEDTF 318

  Fly   370 -------VKTVAQHASQLQVNLLLQESMMLYEAS-HPNVLSVLGI----------SIEDYATPFV 416
                   .||:..:||.:|::..|.::::.|..: |.|:..|..:          ::.|:  |.|
 Worm   319 CNQEAVYTKTLKNNASPIQLDRFLSDALLFYNITPHQNLSQVACVASFGRFDRPETVTDF--PLV 381

  Fly   417 LYAATGSVRNLKSFL------QDPSYARSVTTIQTVLMGSQLAMAMEHLHNHGVIHKDIAARNCV 475
            .|...| ..|||.||      .....|:::.|.|.|.:.:|::.|:.|:|.:.::|.|||||||:
 Worm   382 CYRHQG-FGNLKKFLTICRHGDKTKGAQTLRTHQLVSLATQVSSAVAHIHKYRIVHNDIAARNCL 445

  Fly   476 I---DDQLRVKLTDSALSRDLFPGDYNSLGDGEYRPIKWLSLEALQKSHYNEGSDVWSFGVLMWE 537
            |   :.:|:|:|.||||||||||.||:.|||.|.||:||:|.||:....|:..:||||.|||:||
 Worm   446 IAEVNGRLQVQLCDSALSRDLFPADYHCLGDNENRPLKWMSPEAIANELYSSAADVWSLGVLLWE 510

  Fly   538 MCTLGKLPYAEIDPYEMEHYLKDGYRLAQPFNCPDELFTIMAYCWASMPAERPSFSQLQICLSEF 602
            :.:||..|:|||||.|:...:..|.||.||.||||:|:.:|..||..:..:|||..|:...|.:|
 Worm   511 LMSLGGSPHAEIDPEEVYTMILKGKRLQQPNNCPDQLYEVMLCCWRVLSEDRPSSEQVVHGLRDF 575

  Fly   603 HTQITRYV 610
            :.|:::|:
 Worm   576 NIQLSQYI 583

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
drlNP_001260566.1 WIF 21..157 CDD:128745 41/147 (28%)
PTK_Ryk 336..606 CDD:270639 109/307 (36%)
Pkinase_Tyr 343..599 CDD:285015 106/293 (36%)
lin-18NP_508684.4 WIF 19..149 CDD:128745 41/143 (29%)
PTK_Ryk 274..579 CDD:270639 111/321 (35%)
Pkinase_Tyr 289..572 CDD:285015 105/285 (37%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 187 1.000 Domainoid score I1974
eggNOG 1 0.900 - - E1_KOG1025
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 264 1.000 Inparanoid score I1880
Isobase 1 0.950 - 0 Normalized mean entropy S3376
OMA 1 1.010 - - QHG45854
OrthoDB 1 1.010 - - D359098at33208
OrthoFinder 1 1.000 - - FOG0005256
OrthoInspector 1 1.000 - - otm14716
orthoMCL 1 0.900 - - OOG6_106190
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3316
SonicParanoid 1 1.000 - - X3777
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1413.760

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