DRSC/TRiP Functional Genomics Resources

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Protein Alignment drl and Ryk

DIOPT Version :9

Sequence 1:NP_001260566.1 Gene:drl / 44355 FlyBaseID:FBgn0015380 Length:645 Species:Drosophila melanogaster
Sequence 2:NP_536327.1 Gene:Ryk / 140585 RGDID:620549 Length:594 Species:Rattus norvegicus


Alignment Length:645 Identity:220/645 - (34%)
Similarity:335/645 - (51%) Gaps:106/645 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 PNLLTIGLLLTLI------------ASGQAHLNIFLNLHEVLRLIGVSAELYYVREGAINDYALN 55
            |.||.  |||.::            |.....::::|:..||.||:|:.|||||||...|:.|||:
  Rat    19 PPLLL--LLLAMLPAAAPRSPALAAAPAGPSVSLYLSEDEVRRLLGLDAELYYVRNDLISHYALS 81

  Fly    56 FAVPVPANISDVTFTW--QSLVDHPLPYSINIATSDTEVLPRPILNISRIGDVPVEPQTWGIALK 118
            |.:.||:..:.:.|||  :|.|::.|.:.::    :...:..|.:|||..|:||.....:.:.|.
  Rat    82 FNLLVPSETNFLHFTWHAKSKVEYKLGFQVD----NFVAMGMPQVNISAQGEVPRTLSVFRVELS 142

  Fly   119 CSGTRNAEVTVTINVEVILDRATNNNTNLIFKRKKICLREEQDSAHEEYDDDDLDLLQTARKGHG 183
            |:|..::||.:.:.:.:.:: ::.|.|.|.|||:|:|.::             |:.::|:.    
  Rat   143 CTGKVDSEVMILMQLNLTVN-SSKNFTVLNFKRRKMCYKK-------------LEEVKTSA---- 189

  Fly   184 GDIHYVDRNDEHVVANGHQAPEKQRPVVTESPVGRGNSGGSKRDFDPMLRENLVPPASGLVTLIV 248
                 :|:|....:                              :||:   :..|..|..|..|.
  Rat   190 -----LDKNTSRTI------------------------------YDPV---HAAPTTSTRVFYIS 216

  Fly   249 GGILALVLVSTLILIAYCAKGPSKR----------HPSNGVHLIKTSSFQRLPTISSTAHNSIYV 303
            .|:...|:....|::|.......||          ..|.|:....|.:.|.|.  :.|.:|:..|
  Rat   217 VGVCCAVIFLVAIILAVLHLHSMKRIELDDSISASSSSQGLSQPSTQTTQYLR--ADTPNNATPV 279

  Fly   304 CPSTITPTYATLTRPFREYEHEPEEFNRRLQELTVQKCRVRLSCLVQEGNFGRIYRGTY------ 362
            ..|:..||........|..  ...|...:::::.:.:.||.|..::|||.||||:.|..      
  Rat   280 TSSSGYPTLRIEKNDLRSV--TLLEAKAKVKDIAISRERVTLKDVLQEGTFGRIFHGILVDEKDP 342

  Fly   363 NDCQEVLVKTVAQHASQLQVNLLLQESMMLYEASHPNVLSVLGISIEDYATPFVL--YAATGSVR 425
            |..::..||||...||::||.::|.||..|....|.|:|.:..:.||:...|.|:  |...|   
  Rat   343 NKEKQTFVKTVKDQASEVQVTMMLTESCKLRGLHHRNLLPITHVCIEEGEKPMVISPYMNWG--- 404

  Fly   426 NLKSFLQ-----DPSYARSVTTIQTVLMGSQLAMAMEHLHNHGVIHKDIAARNCVIDDQLRVKLT 485
            |||.||:     :.:..::::....|.|..|:|..|.:|....|||||:|||||||||.|:||:|
  Rat   405 NLKLFLRQCKLVEANNPQAISQQDLVHMAIQIACGMSYLARREVIHKDLAARNCVIDDTLQVKIT 469

  Fly   486 DSALSRDLFPGDYNSLGDGEYRPIKWLSLEALQKSHYNEGSDVWSFGVLMWEMCTLGKLPYAEID 550
            |:||||||||.||:.|||.|.||::|::||:|..:.::..||||:|||.:||:.|||:.||.:||
  Rat   470 DNALSRDLFPMDYHCLGDNENRPVRWMALESLVNNEFSSASDVWAFGVTLWELMTLGQTPYVDID 534

  Fly   551 PYEMEHYLKDGYRLAQPFNCPDELFTIMAYCWASMPAERPSFSQLQICLSEFHTQITRYV 610
            |:||..|||||||:|||.|||||||.:||.|||..|.|||.|.||..||:|||..:..||
  Rat   535 PFEMAAYLKDGYRIAQPINCPDELFAVMACCWALDPEERPKFQQLVQCLTEFHAALGAYV 594

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
drlNP_001260566.1 WIF 21..157 CDD:128745 46/137 (34%)
PTK_Ryk 336..606 CDD:270639 136/282 (48%)
Pkinase_Tyr 343..599 CDD:285015 130/268 (49%)
RykNP_536327.1 WIF 47..180 CDD:128745 46/137 (34%)
PTK_Ryk 310..590 CDD:270639 136/282 (48%)
Pkinase_Tyr 317..583 CDD:285015 130/268 (49%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 270 1.000 Domainoid score I1758
eggNOG 1 0.900 - - E1_KOG1025
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 362 1.000 Inparanoid score I2121
OMA 1 1.010 - - QHG45854
OrthoDB 1 1.010 - - D359098at33208
OrthoFinder 1 1.000 - - FOG0005256
OrthoInspector 1 1.000 - - otm45465
orthoMCL 1 0.900 - - OOG6_106190
Panther 1 1.100 - - O PTHR24416
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X3777
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1312.840

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