DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment drl and ltk

DIOPT Version :10

Sequence 1:NP_001260566.1 Gene:drl / 44355 FlyBaseID:FBgn0015380 Length:645 Species:Drosophila melanogaster
Sequence 2:XP_002933782.3 Gene:ltk / 100498306 XenbaseID:XB-GENE-22068681 Length:1314 Species:Xenopus tropicalis


Alignment Length:382 Identity:102/382 - (26%)
Similarity:173/382 - (45%) Gaps:46/382 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly   232 LRENLVPPASGLVTLIVGGILALVLVSTLILIAYCAKGPSKRHPSNGVHLIKTSSFQRLPTISST 296
            |.|..:|.:..|..||...||.::.....:...|    ..|:....|..:...|:..:|..|.|:
 Frog   824 LAEKQLPLSLILAVLIATVILGIIFACGSLSFVY----HRKKKQLEGARVRLQSTEYKLSKIRSS 884

  Fly   297 AHNSIYVCPSTITPTYATLTRPFREYEHEPEEFNRRLQEL-TVQKCRVRLSCLVQEGNFGRIYRG 360
                  :..:...|.|....:            ...|.|| .|.:..:.|...:..|.||.:|.|
 Frog   885 ------IIMTDYNPNYCFAGK------------GASLSELKEVPRKNITLLRALGHGAFGEVYEG 931

  Fly   361 TY-------NDCQEVLVKTVAQHASQLQVNLLLQESMMLYEASHPNVLSVLGISIEDYATPFVLY 418
            ..       |..| |.:||:.:..|:......|.|::::.:.||.|::..:|:|::......:|.
 Frog   932 MVVGISGDPNPLQ-VAIKTLPEICSEQDEMDFLMEALIISKFSHQNIVRCIGVSLQTLPRFILLE 995

  Fly   419 AATGSVRNLKSFLQ-------DPSYARSVTTIQTVLMGSQLAMAMEHLHNHGVIHKDIAARNCVI 476
            ..:|.  ::||||:       .||   :::.:..:.|...:|...::|..:..||:|||||||::
 Frog   996 LMSGG--DMKSFLRQNRPWINQPS---TLSMLDLLNMARDIACGCKYLEENHFIHRDIAARNCLL 1055

  Fly   477 --DDQLRV-KLTDSALSRDLFPGDYNSLGDGEYRPIKWLSLEALQKSHYNEGSDVWSFGVLMWEM 538
              ....|| |:.|..::||::...|...|.....|:||:..||..:..:...:|.||||||:||:
 Frog  1056 TYSGTGRVAKIGDFGMARDIYRASYYRKGGRAMLPVKWMPPEAFLEGVFTSKTDTWSFGVLLWEI 1120

  Fly   539 CTLGKLPYAEIDPYEMEHYLKDGYRLAQPFNCPDELFTIMAYCWASMPAERPSFSQL 595
            .:||.:||......|:..::..|.|:..|.|||..::.||..||...|..||:||.:
 Frog  1121 FSLGYMPYPCKTNQEVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHTPEHRPNFSTI 1177

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
drlNP_001260566.1 WIF 21..157 CDD:128745
PTK_Ryk 336..606 CDD:270639 83/278 (30%)
ltkXP_002933782.3 LDLa 230..263 CDD:197566
MAM 277..431 CDD:99706
PTKc_ALK_LTK 907..1183 CDD:270632 82/277 (30%)
Blue background indicates that the domain is not in the aligned region.

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