DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment drl and ephb4

DIOPT Version :10

Sequence 1:NP_001260566.1 Gene:drl / 44355 FlyBaseID:FBgn0015380 Length:645 Species:Drosophila melanogaster
Sequence 2:XP_031755496.1 Gene:ephb4 / 100497297 XenbaseID:XB-GENE-5881604 Length:945 Species:Xenopus tropicalis


Alignment Length:649 Identity:154/649 - (23%)
Similarity:255/649 - (39%) Gaps:181/649 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    36 GVSAELYYVREGAINDYA----------LNFAVPVPANISD-----------VTFTWQSL----- 74
            |...:|||  |...::.|          ||| .|.|..:.|           ||:.::.|     
 Frog   350 GGRGDLYY--EVQCSECAGGGPCIPCSRLNF-TPRPQRLVDRRLRVAGLRPRVTYNFRVLALNGV 411

  Fly    75 ----VDHPLPYSINIATSDTEVLPRPILNISRIGDVPVEPQTWGIALKCSGTRNAEVTVTINVEV 135
                ....|...:|: |:|.:| |.|:..|.::.                   .:|.|:|:....
 Frog   412 SERSTSGALGEEVNV-TTDRDV-PLPVSGIQQMA-------------------ASETTLTLRWAT 455

  Fly   136 ILDRATNNNTNLIFKRKKICLREEQ-----------DSAHEEYDDDDLDLLQTARK---GHG--- 183
            .|..|......|.::.|.....:|:           ::...|.....:.::|...:   |:|   
 Frog   456 PLHSAPTKGNILDYEVKYYAKDQEKPLIKFMKTTSNEALLAELLSGTVYVVQVRARTEAGYGAFS 520

  Fly   184 GDIHYVDRNDEHVVANGHQAPEKQRPVVTESPVGRGNSGGSKRDFDPMLRENLVPPASGLVTLIV 248
            ||          .:....:.|||.:|.|.                       |:...:|:.||:|
 Frog   521 GD----------TLVQTLEGPEKAQPQVA-----------------------LIAGTAGVGTLLV 552

  Fly   249 GGILALVLVSTLILIAYCAKGPSKRHP----SNGVHLIKTSSFQRLPTISSTAHNS-IYVCPSTI 308
               || |:|:.::.|   .|..|.:.|    ..|.:||              .||| :|:.|.| 
 Frog   553 ---LA-VIVTAVVCI---RKHGSSKEPEYCDKPGQYLI--------------GHNSKVYIDPFT- 595

  Fly   309 TPTYATLTRPFREYEHEPEEFNRRLQELTVQKCRVRLSCLVQEGNFGRIYRG---------TYND 364
                         ||...|......:|:.| .| |::..::..|.||.:.||         .|  
 Frog   596 -------------YEDPNEAVREFAKEIDV-SC-VKIEEVIGAGEFGEVCRGRLKVPGKKENY-- 643

  Fly   365 CQEVLVKTVAQHASQLQVNLLLQESMMLYEASHPNVLSVLGISIEDYATPFVL-YAATGSVRNLK 428
               |.:||:....::.|....|.|:.::.:.:|||::.:.|:...:.....:. |...|:   |.
 Frog   644 ---VAIKTLKGGYTERQRREFLSEASIMGQFNHPNIIHLEGVITNNCPVMIITEYMENGA---LD 702

  Fly   429 SFLQ--DPSYARSVTTIQTVLMGSQLAMAMEHLHNHGVIHKDIAARNCVIDDQLRVKLTDSALSR 491
            |||:  |..:    |.||.|.|...:|..|.:|.....:|:|:||||.:::..|..|::|..|||
 Frog   703 SFLRQNDGQF----TPIQLVGMLRGIASGMRYLAEMNYVHRDLAARNILVNSNLVCKVSDFGLSR 763

  Fly   492 DLFPGD----YNSLGDGEYRPIKWLSLEALQKSHYNEGSDVWSFGVLMWEMCTLGKLPYAEIDPY 552
            .|..|.    |.|...|:. ||:|.:.||:....:...||||.:|::|||:.:.|:.||.::...
 Frog   764 FLQEGSTDPTYTSCLGGKI-PIRWTAPEAIAFRKFTSASDVWGYGIVMWEVMSFGERPYWDMSNQ 827

  Fly   553 EMEHYLKDGYRLAQPFNCPDELFTIMAYCWASMPAERPSFSQLQICLSEFHTQITRYVXPAVLK 616
            ::.:.::..|||..|.:||..|..:|..||....|.||.|:.:...|.:....      ||.||
 Frog   828 DVINAIEQDYRLPAPPDCPTALHQLMLDCWQRDRALRPRFADIVSSLDKLIRN------PASLK 885

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
drlNP_001260566.1 WIF 21..157 CDD:128745 30/150 (20%)
PTK_Ryk 336..606 CDD:270639 82/285 (29%)
ephb4XP_031755496.1 EphR_LBD_B4 17..196 CDD:198442
FN3 <321..>548 CDD:442628 44/254 (17%)
EphA2_TM 541..612 CDD:464211 25/105 (24%)
PTKc_EphR_B 610..878 CDD:173638 82/282 (29%)
SAM_superfamily 907..>945 CDD:472832
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.