DRSC/TRiP Functional Genomics Resources

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Protein Alignment drl and epha6

DIOPT Version :10

Sequence 1:NP_001260566.1 Gene:drl / 44355 FlyBaseID:FBgn0015380 Length:645 Species:Drosophila melanogaster
Sequence 2:XP_031752444.1 Gene:epha6 / 100495504 XenbaseID:XB-GENE-6032564 Length:1008 Species:Xenopus tropicalis


Alignment Length:559 Identity:137/559 - (24%)
Similarity:225/559 - (40%) Gaps:134/559 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   120 SGTRNAEVTV---------TINVEVILDRATNNNTNLIFKRK---KICLREEQDSAHEEYDDDDL 172
            ||.:||.|||         |.::|     |||..:.|.|..|   .|.:..:|::.         
 Frog   391 SGLQNASVTVLDFLSHVNYTFDIE-----ATNGVSELSFLPKPYTSIMITTDQEAP--------- 441

  Fly   173 DLLQTARKGHGG---------------------DIHYVDRN--------------DEHVVANGHQ 202
            .|:...||....                     :|.|.:::              :||...:...
 Frog   442 SLIGMVRKDWASQNSIALSWQEPDYPKGLIVDYEIKYYEKDYPRIAPAFWHYLRVEEHEQLSYSS 506

  Fly   203 APEKQRPVVTE--SPVGR-----------GNSGGS-KRDFDPMLRENLVPPASG----LVTLIVG 249
            ...|...|:..  .|..:           |.|..| |.:|:.....:.:....|    :.|..||
 Frog   507 TRSKAPSVIITGLKPATKYIFHIRVRTTAGYSAYSHKFEFETGDETSDLAAEQGQILVIATAAVG 571

  Fly   250 GILALVLVSTLILI-AYC-------AKGPSKRHPS--NGVHLIKTSSFQRLPTISSTAHNSIYVC 304
            |...||:::...|| ..|       .|...||..:  || ||       :.|.:.:      |:.
 Frog   572 GFTLLVILTLFFLITGRCQWYIKAKMKSEEKRRANLQNG-HL-------QFPGVKT------YID 622

  Fly   305 PSTITPTYATLTRPFREYEHEPEEFNRRLQELTVQKCRVRLSCLVQEGNFGRIYRGTYNDCQE-- 367
            |.    ||...:....|:..|            :...|:|:..::..|.||.:..|......:  
 Frog   623 PD----TYEDPSLAVHEFAKE------------IDPSRIRIERVIGAGEFGEVCSGRLKTPAKKE 671

  Fly   368 --VLVKTVAQHASQLQVNLLLQESMMLYEASHPNVLSVLGISIEDYATPFVL-YAATGSVRNLKS 429
              |.:||:.......|....|:|:.::.:..|||::.:.|:..:......|: |...||   |.|
 Frog   672 IPVAIKTLKGGYVDRQRKDFLREASIMGQFDHPNIIRLEGVVTKSRPVMIVVEYMENGS---LDS 733

  Fly   430 FLQDPSYARSVTTIQTVLMGSQLAMAMEHLHNHGVIHKDIAARNCVIDDQLRVKLTDSALSR--- 491
            ||:  .:....|.||.|.|...:|..|::|.:.|.:|:|:||||.:::..|..|::|..|||   
 Frog   734 FLR--KHDGQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILVNSNLVCKVSDFGLSRVLE 796

  Fly   492 DLFPGDYNSLGDGEYRPIKWLSLEALQKSHYNEGSDVWSFGVLMWEMCTLGKLPYAEIDPYEMEH 556
            |.....|.:.| |:. ||:|.:.||:....::..||.||:|::|||:.:.|:.||.|:...::..
 Frog   797 DDPDAAYTTTG-GKI-PIRWTAPEAIAFRKFSSASDAWSYGIVMWEVMSYGERPYWEMSNQDVIL 859

  Fly   557 YLKDGYRLAQPFNCPDELFTIMAYCWASMPAERPSFSQL 595
            .:::||||..|..||..|..:|.:||......||.||.:
 Frog   860 SIEEGYRLPAPMGCPVSLHQLMLHCWQKDRNIRPKFSDI 898

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
drlNP_001260566.1 WIF 21..157 CDD:128745 16/48 (33%)
PTK_Ryk 336..606 CDD:270639 81/268 (30%)
epha6XP_031752444.1 EphR_LBD_A6 34..206 CDD:198452
FN3 333..421 CDD:473895 12/34 (35%)
FN3 441..548 CDD:238020 15/115 (13%)
EphA2_TM 565..642 CDD:464211 23/106 (22%)
PTKc_EphR_A 640..906 CDD:270651 81/266 (30%)
SAM_EPH-A6 933..996 CDD:188946
Blue background indicates that the domain is not in the aligned region.

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