DRSC/TRiP Functional Genomics Resources

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Protein Alignment drl and fgfr3

DIOPT Version :10

Sequence 1:NP_001260566.1 Gene:drl / 44355 FlyBaseID:FBgn0015380 Length:645 Species:Drosophila melanogaster
Sequence 2:XP_012812743.1 Gene:fgfr3 / 100196923 XenbaseID:XB-GENE-479255 Length:829 Species:Xenopus tropicalis


Alignment Length:597 Identity:160/597 - (26%)
Similarity:248/597 - (41%) Gaps:154/597 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   102 RIGDVPVEPQTWGIALKCSGTRNAEVTVTINVEVILDRATNNNTNLIFKRKKICLREEQ-DSAHE 165
            |||.:.:..|.|.:.:                |.::.....|.|         |:.|.: .|..:
 Frog   216 RIGGIKLRHQQWSLVM----------------ESVVPSDKGNYT---------CVVENKYGSIRQ 255

  Fly   166 EYDDDDLDLLQTARKGH----------------GGDIH-----YVDRND-----EHVVANGHQ-A 203
            .|   .||:|:  |..|                |.|:.     |.|...     :||..||.: .
 Frog   256 TY---QLDVLE--RSSHRPILQAGLPANQTVVIGSDVEFHCKVYSDAQPHIQWLKHVEVNGSKYG 315

  Fly   204 PEKQRPV--------------------VTESPVG----RGNS--GGSKRDF----------DPML 232
            |:....|                    |||:..|    |.|:  |.::..|          :|:.
 Frog   316 PDGDPYVTVLQSFTNGTEVDTTLSLKNVTETHEGQYVCRANNFIGVAEASFWLHIYKPASAEPVE 380

  Fly   233 RENLVPPASGLVTLIVGGILALVLVSTLILIAYCAKGPSKRHPS-NGVHLIKTSSF----QRLPT 292
            :......:|..|.::|..|...:|: .:|.:.|..|.|||:..| ..||  |.|.|    |::..
 Frog   381 KPTTTSSSSTTVLIVVSVITGFILL-VIIFVTYRVKVPSKKAMSAPPVH--KVSKFPLKRQQVSL 442

  Fly   293 ISSTAHNS---------IYVCPSTITPTYATLTRPFREYEHEPEEFNRRLQELTVQKCRVRLSCL 348
            .|:::.||         :.....|:....:.|..|.     :|:      .||.  :.|:.|...
 Frog   443 ESNSSMNSNTPLVRITHLSSSDGTMLANVSELGLPL-----DPK------WELL--RTRLTLGKP 494

  Fly   349 VQEGNFGR--------IYRGTYNDCQEVLVKTVAQHASQLQVNLLLQE-SMMLYEASHPNVLSVL 404
            :.||.||:        |.:...|....|.||.:...|:...::.|:.| .||.....|.|::::|
 Frog   495 LGEGCFGQVVMAEAIGIEKERPNKPVTVAVKMLKDDATDKDLSDLVSEMEMMKMIGKHKNIINLL 559

  Fly   405 GISIED---YATPFVLYAATGSVRNLKSFLQ-------DPSY------ARSVTTIQTVLMGSQLA 453
            |...:|   |.  .|.||:.|   ||:.:|:       |.|:      |..:|....|....|:|
 Frog   560 GACTQDGPLYV--LVEYASKG---NLREYLKARRPPGMDYSFDTCKIPAEQLTFKDLVSCAYQVA 619

  Fly   454 MAMEHLHNHGVIHKDIAARNCVIDDQLRVKLTDSALSRDLFPGDYNSLGDGEYRPIKWLSLEALQ 518
            ..||:|.:...||:|:||||.::.|...:|:.|..|:||:...||.........|:||::.|||.
 Frog   620 RGMEYLASQKCIHRDLAARNVLVTDDNVMKIADFGLARDIHNIDYYKKTTNGRLPVKWMAPEALF 684

  Fly   519 KSHYNEGSDVWSFGVLMWEMCTLGKLPYAEIDPYEMEHYLKDGYRLAQPFNCPDELFTIMAYCWA 583
            ...|...|||||:|||:||..|||..||..|...|:...||:|:|:.:|.||..||:.||..||.
 Frog   685 DRIYTHQSDVWSYGVLLWETFTLGGSPYPGIPVEELFKLLKEGHRMDKPANCTHELYMIMRECWH 749

  Fly   584 SMPAERPSFSQL 595
            ::|::||:|.||
 Frog   750 AVPSQRPTFKQL 761

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
drlNP_001260566.1 WIF 21..157 CDD:128745 9/54 (17%)
PTK_Ryk 336..606 CDD:270639 98/285 (34%)
fgfr3XP_012812743.1 Ig <75..128 CDD:472250
Ig strand B 78..82 CDD:409353
Ig strand C 90..94 CDD:409353
Ig strand E 111..115 CDD:409353
IgI_2_FGFR 167..261 CDD:409443 13/72 (18%)
Ig strand A 167..170 CDD:409443
Ig strand A' 178..183 CDD:409443
Ig strand B 187..195 CDD:409443
Ig strand C 201..206 CDD:409443
Ig strand C' 209..211 CDD:409443
Ig strand D 220..223 CDD:409443 0/2 (0%)
Ig strand E 227..232 CDD:409443 1/20 (5%)
Ig strand F 241..248 CDD:409443 3/15 (20%)
Ig strand G 251..261 CDD:409443 3/12 (25%)
IgI_3_FGFR 269..369 CDD:409363 18/99 (18%)
Ig strand A 269..272 CDD:409363 0/2 (0%)
Ig strand A' 276..280 CDD:409363 0/3 (0%)
Ig strand B 288..295 CDD:409363 0/6 (0%)
Ig strand C 299..306 CDD:409363 0/6 (0%)
Ig strand D 321..326 CDD:409363 1/4 (25%)
Ig strand E 336..341 CDD:409363 0/4 (0%)
Ig strand F 349..357 CDD:409363 2/7 (29%)
Ig strand G 360..368 CDD:409363 2/7 (29%)
PTKc_FGFR3 476..809 CDD:173652 101/304 (33%)
Blue background indicates that the domain is not in the aligned region.

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