DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Shark and HT1

DIOPT Version :10

Sequence 1:NP_524743.2 Gene:Shark / 44353 FlyBaseID:FBgn0015295 Length:939 Species:Drosophila melanogaster
Sequence 2:NP_176430.2 Gene:HT1 / 842538 AraportID:AT1G62400 Length:390 Species:Arabidopsis thaliana


Alignment Length:314 Identity:85/314 - (27%)
Similarity:138/314 - (43%) Gaps:48/314 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly   640 PSTPSAT------EVEAAKLRFF--IEPEKLVLDR------EIGHGEFGSVHSGW--------LL 682
            |..||::      |.|..:.:.|  :|...::|:.      |...||    ...|        :.
plant    29 PCNPSSSKTNRYAEAETMEKKRFDSMESWSMILESENVETWEASKGE----REEWTADLSQLFIG 89

  Fly   683 RKSGAGEESRL--------EVAIKML-----SDEHSNK--QEFLREASVMMRLEHKCIVRLIGIA 732
            .|..:|..||:        .||:||:     .:|...|  |:|..|.:::.||.|..||:.|...
plant    90 NKFASGAHSRIYRGIYKQRAVAVKMVRIPTHKEETRAKLEQQFKSEVALLSRLFHPNIVQFIAAC 154

  Fly   733 -KGEMLMMVQELAPLGSMLQYI-LDHGHEITANAELKVWASQIACGMHYLESQHFVHRDLAARNI 795
             |..:..::.|....|::..|: ....:.::....|:: |..|:.||.||.||..:||||.:.|:
plant   155 KKPPVYCIITEYMSQGNLRMYLNKKEPYSLSIETVLRL-ALDISRGMEYLHSQGVIHRDLKSNNL 218

  Fly   796 LLTARHQAKISDFGMSRSLRPGSTEYQFTQGGRWPIRWYAPESFNLGIFSHASDVWSFGVTIWEM 860
            ||....:.|::|||.|..    .|:.:..:|.....||.|||......::...||:|||:.:||:
plant   219 LLNDEMRVKVADFGTSCL----ETQCREAKGNMGTYRWMAPEMIKEKPYTRKVDVYSFGIVLWEL 279

  Fly   861 FSLGAPPYGEISNVDAIKLVDSGERLPQPNLCPAYIYAVMQSCWKERPKDRPTF 914
            .:...|..|......|..:.:..||.|.|..|...:..:::.||.|.|..||.|
plant   280 TTALLPFQGMTPVQAAFAVAEKNERPPLPASCQPALAHLIKRCWSENPSKRPDF 333

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SharkNP_524743.2 SH2_Nterm_shark_like 8..91 CDD:198210
ANKYR <94..317 CDD:440430
ANK repeat 124..151 CDD:293786
ANK repeat 153..184 CDD:293786
ANK repeat 186..217 CDD:293786
ANK repeat 220..245 CDD:293786
SH2_Cterm_shark_like 287..395 CDD:198211
PTKc_Syk_like 666..926 CDD:270650 77/280 (28%)
HT1NP_176430.2 STKc_MAP3K-like 93..340 CDD:270901 72/246 (29%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.