DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Shark and ATN1

DIOPT Version :9

Sequence 1:NP_524743.2 Gene:Shark / 44353 FlyBaseID:FBgn0015295 Length:939 Species:Drosophila melanogaster
Sequence 2:NP_189393.1 Gene:ATN1 / 822378 AraportID:AT3G27560 Length:356 Species:Arabidopsis thaliana


Alignment Length:297 Identity:82/297 - (27%)
Similarity:146/297 - (49%) Gaps:31/297 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly   654 RFFIEPEKLVLDREIGHGEFGSVHSGWLLRKSGAGEESRLEVAIKML----SDEHSNKQE--FLR 712
            ::.::|..|.:..:||.|....|:.|....::         ||||::    |.|...|::  |.|
plant    18 KWLVDPRHLFVGPKIGEGAHAKVYEGKYRNQT---------VAIKIIKRGESPEEIAKRDNRFAR 73

  Fly   713 EASVMMRLEHKCIVRLIGIAKGEMLMMVQELAPLGSMLQYILDHGHEITANAELKV-WASQIACG 776
            |.:::.:::||.:|:.||..|..|:::|.||...|::.:|::....: ..:..|.| :|..||..
plant    74 EIAMLSKVQHKNLVKFIGACKEPMMVIVTELLLGGTLRKYLVSLRPK-RLDIRLAVGFALDIARA 137

  Fly   777 MHYLESQHFVHRDLAARNILLTARHQ-AKISDFGMSRSLRPGSTEYQFTQGGRWPIRWYAPESFN 840
            |..|.|...:||||...|::|:|.|: .|::|||::|  ....||....:.|.:  ||.|||.::
plant   138 MECLHSHGIIHRDLKPENLILSADHKTVKLADFGLAR--EESLTEMMTAETGTY--RWMAPELYS 198

  Fly   841 LGI--------FSHASDVWSFGVTIWEMFSLGAPPYGEISNVDAIKLVDSGERLPQPNLCPAYIY 897
            ...        ::|..|.:||.:.:||:. |...|:..:||:.|..........|.....|..:.
plant   199 TVTLRQGEKKHYNHKVDAYSFAIVLWELI-LNKLPFEGMSNLQAAYAAAFKNLRPSAEDLPGDLE 262

  Fly   898 AVMQSCWKERPKDRPTFVYLTEFFARDPDYQNLPELV 934
            .::.|||||.|.:||.|..:.:...|.....:.|:::
plant   263 MIVTSCWKEDPNERPNFTEIIQMLLRYLTTVSAPQII 299

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SharkNP_524743.2 SH2_Nterm_shark_like 8..91 CDD:198210
Ank_2 <112..184 CDD:289560
ANK 117..241 CDD:238125
ANK repeat 124..151 CDD:293786
ANK repeat 153..184 CDD:293786
Ank_2 158..247 CDD:289560
ANK repeat 186..217 CDD:293786
ANK repeat 220..245 CDD:293786
Ank_4 224..274 CDD:290365
SH2_Cterm_shark_like 287..395 CDD:198211
TyrKc 662..921 CDD:197581 79/274 (29%)
PTKc_Syk_like 666..926 CDD:270650 79/275 (29%)
ATN1NP_189393.1 STKc_MAP3K-like 32..286 CDD:270901 78/268 (29%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 148 1.000 Inparanoid score I1725
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
22.050

Return to query results.
Submit another query.