DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Shark and matk

DIOPT Version :10

Sequence 1:NP_524743.2 Gene:Shark / 44353 FlyBaseID:FBgn0015295 Length:939 Species:Drosophila melanogaster
Sequence 2:XP_695792.2 Gene:matk / 567405 ZFINID:ZDB-GENE-070705-183 Length:445 Species:Danio rerio


Alignment Length:469 Identity:137/469 - (29%)
Similarity:214/469 - (45%) Gaps:85/469 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   487 KSKGKRSDSESSV-SGSLAGTEQELQAAAPMLKSLSFSTEFSTFNADG-VTGSGAAAAGEVYNVP 549
            |...|..|.|.|. .|.:      |....|.::...::...:|...:| |:||..          
Zfish    16 KDHCKPKDGEISYHKGDI------LTLVGPGMRKGEYTARHNTTGEEGQVSGSNL---------- 64

  Fly   550 RNNTPIEIDLPPIAQKTEAEVEYFTKSDVAIERERAGQWIGNGYQPTMDVLSLLDQQIKAP---- 610
            |....:.|| |.::.     :.:|       ..:.|||...:..:||.|.|.|:.:.::.|    
Zfish    65 REREALRID-PKLSL-----MPWF-------HGKIAGQQAVDKLKPTEDGLFLVRESVRHPGDFV 116

  Fly   611 -------------AVARLNSLGPN---------------ASTESEMASYL--HRKCSGTPSTPSA 645
                         .:.:.|.|..:               :.....:|:.|  .:|..|..|    
Zfish   117 LCVCFSQKVFHYRVIYQDNKLTIDNMQFFDNLIDMIEFYSRNRGAIATLLLKPKKKEGLKS---- 177

  Fly   646 TEVEAAKLRFFIEPEKLVLDREIGHGEFGSVHSGWLLRKSGAGEESRLEVAIKMLSDEHSNKQEF 710
            .|.:..|..:.::..||.|...||.||||:|.         |||.:...||:|::..: ...|.|
Zfish   178 AETKLLKSGWLLDLSKLTLGEIIGEGEFGAVF---------AGEYAGQRVAVKIIKCD-VTAQAF 232

  Fly   711 LREASVMMRLEHKCIVRLIGIAKGEMLMMVQELAPLGSMLQYILDHGHEITANAELKVWASQIAC 775
            |.|.|||..|.||.:|.|:|:.....|.:|.||...|:::.::...|....:..:|..:|..:..
Zfish   233 LEETSVMTNLHHKNLVPLLGVILHNGLHIVTELMTKGNLVNFLRSRGRFAVSVIQLLRFALDVCE 297

  Fly   776 GMHYLESQHFVHRDLAARNILLTARHQAKISDFGMSRSLRPGSTEYQFTQGGRWPIRWYAPESFN 840
            ||.:|||:..:|||||.||||::....|||||||::   |.||   ......:.|::|.|||:..
Zfish   298 GMEHLESKKLLHRDLAGRNILVSEDGVAKISDFGLA---RVGS---MAVDNSKLPVKWTAPEALK 356

  Fly   841 LGIFSHASDVWSFGVTIWEMFSLGAPPYGEISNVDAIKLVDSGERLPQPNLCPAYIYAVMQSCWK 905
            ...||..|||||:||.:||:||.|..||.:::..:..:.|:.|.|:..|:.|||.:|::|.|||:
Zfish   357 NKKFSTQSDVWSYGVLLWEIFSYGRQPYPKMTVNEVKECVEKGYRMDPPDECPADVYSIMTSCWQ 421

  Fly   906 ERPKDRPTFVYLTE 919
            ..||.||:|..|.|
Zfish   422 TEPKKRPSFHKLRE 435

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SharkNP_524743.2 SH2_Nterm_shark_like 8..91 CDD:198210
ANKYR <94..317 CDD:440430
ANK repeat 124..151 CDD:293786
ANK repeat 153..184 CDD:293786
ANK repeat 186..217 CDD:293786
ANK repeat 220..245 CDD:293786
SH2_Cterm_shark_like 287..395 CDD:198211
PTKc_Syk_like 666..926 CDD:270650 98/254 (39%)
matkXP_695792.2 None
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.