DRSC/TRiP Functional Genomics Resources

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Protein Alignment Shark and ptk2ba

DIOPT Version :10

Sequence 1:NP_524743.2 Gene:Shark / 44353 FlyBaseID:FBgn0015295 Length:939 Species:Drosophila melanogaster
Sequence 2:XP_005158634.1 Gene:ptk2ba / 557258 ZFINID:ZDB-GENE-080207-1 Length:933 Species:Danio rerio


Alignment Length:346 Identity:126/346 - (36%)
Similarity:188/346 - (54%) Gaps:21/346 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly   592 GYQPTMDVLSLLDQQIKAPAVARLNSLGPNASTESEMASYLHRKCSGT-PSTPSATEVEAAKLRF 655
            |.:.|:.|....|::.:       |||.|...::....|:...|.|.. ...|....:.|.|  |
Zfish   338 GNEKTLIVWPNKDRESR-------NSLPPLPGSKENTTSHKEGKNSDIYAEIPEEKPLAACK--F 393

  Fly   656 FIEPEKLVLDREIGHGEFGSVHSGWLLRKSGAGEESRLEVAIKMLSDEHSN-KQEFLREASVMMR 719
            .|....:||.|.:|.|.||.||.|  :.||.:||  |:.||:|...|..:: |::|:.||.:|.:
Zfish   394 SISRNDIVLGRILGEGFFGEVHDG--IYKSKSGE--RVNVAVKTCKDCSADVKEKFMSEALIMKK 454

  Fly   720 LEHKCIVRLIGIAKGEMLMMVQELAPLGSMLQYILDHGHEITANAELKVWASQIACGMHYLESQH 784
            |:|..|||||||.:.:.:.:|.||.|.|.:..|:.|:.:::| |..|.:::.||:..:.|||..:
Zfish   455 LDHPHIVRLIGIIEEDPVWIVMELYPFGELENYLKDNQNKLT-NVTLILYSLQISKALAYLEGVN 518

  Fly   785 FVHRDLAARNILLTARHQAKISDFGMSRSLRPGSTEYQFTQGGRWPIRWYAPESFNLGIFSHASD 849
            .||||:|.||:|:......|:.|||:||.:.  ..||......|.||:|.||||.|...|:.|||
Zfish   519 MVHRDIAVRNVLVAKVDCVKLGDFGLSRYIE--EEEYYKASVTRLPIKWMAPESINFRRFTSASD 581

  Fly   850 VWSFGVTIWEMFSLGAPPYGEISNVDAIKLVDSGERLPQPNLCPAYIYAVMQSCWKERPKDRPTF 914
            ||.|.|.:||:.|.|..|:..:.|.|.|..::.|.|||:|..||..:|::|..||...|:|||:|
Zfish   582 VWMFAVCMWEIMSGGQQPFFWLENKDVINQLEQGMRLPKPERCPPTLYSLMTRCWSYSPRDRPSF 646

  Fly   915 VYLTEFFARDPDYQNLPELVQ 935
               ||...:..|...|.:.|:
Zfish   647 ---TELVCKLSDVHKLEQEVE 664

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SharkNP_524743.2 SH2_Nterm_shark_like 8..91 CDD:198210
ANKYR <94..317 CDD:440430
ANK repeat 124..151 CDD:293786
ANK repeat 153..184 CDD:293786
ANK repeat 186..217 CDD:293786
ANK repeat 220..245 CDD:293786
SH2_Cterm_shark_like 287..395 CDD:198211
PTKc_Syk_like 666..926 CDD:270650 105/260 (40%)
ptk2baXP_005158634.1 FERM_N_2 20..118 CDD:436229
B41 33..246 CDD:214604
FERM_C_FAK1 242..351 CDD:270011 3/12 (25%)
Protein Kinases, catalytic domain 393..657 CDD:473864 110/273 (40%)
Focal_AT 796..925 CDD:460992
Blue background indicates that the domain is not in the aligned region.

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