DRSC/TRiP Functional Genomics Resources

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Protein Alignment Shark and csk

DIOPT Version :10

Sequence 1:NP_524743.2 Gene:Shark / 44353 FlyBaseID:FBgn0015295 Length:939 Species:Drosophila melanogaster
Sequence 2:NP_001071067.1 Gene:csk / 556454 ZFINID:ZDB-GENE-061103-493 Length:450 Species:Danio rerio


Alignment Length:637 Identity:137/637 - (21%)
Similarity:216/637 - (33%) Gaps:285/637 - (44%)


- Green bases have known domain annotations that are detailed below.


  Fly   288 WYHGTLTREEAVAILKKHAKELLAKQPEVDTSGCFLVRYSESPAASG-LVLTLLCDQVVKNFRIS 351
            |:||.:|||:|         |.|...||   :|.||||  ||....| ..|.:.||..|:::|| 
Zfish    82 WFHGKITREQA---------ERLLYPPE---TGLFLVR--ESTNYPGDYTLCVSCDGKVEHYRI- 131

  Fly   352 QADLYQNGNKVQSGGSKFLYIDDGPYWPSVEHLIAHFMRFSYGLPVSLKYPVPPQPKPEVPSFAT 416
               :|.||.         |.||:..|:.::..|:.|:.:.:.||                     
Zfish   132 ---IYHNGK---------LSIDEEEYFENLMQLMEHYTKDADGL--------------------- 163

  Fly   417 IPRSNMKPKAASPATPPTPVSPHSHHQHPHVPALTITKKKQKENSSSMFNTLRLTSPKKALFDMN 481
                                                              ..||..||       
Zfish   164 --------------------------------------------------CTRLIKPK------- 171

  Fly   482 SLRKNKSKGKRSDSESSVSGSLAGTEQELQAAAPMLKSLSFSTEFSTFNADGVTGSGAAAAGEVY 546
                                                                             
Zfish   172 ----------------------------------------------------------------- 171

  Fly   547 NVPRNNTPIEIDLPPIAQKTEAEVEYFTKSDVAIERERAGQWIGNGYQPTMDVLSLLDQQIKAPA 611
                           |.:.|.|..:.|::|..|:.|                             
Zfish   172 ---------------IMEGTVAAQDEFSRSGWALNR----------------------------- 192

  Fly   612 VARLNSLGPNASTESEMASYLHRKCSGTPSTPSATEVEAAKLRFFIEPEKLVLDREIGHGEFGSV 676
                                                            ::|.|.:.||.||||.|
Zfish   193 ------------------------------------------------KELKLIQTIGKGEFGDV 209

  Fly   677 HSGWLLRKSGAGEESRLEVAIKMLSDEHSNKQEFLREASVMMRLEHKCIVRLIGI---AKGEMLM 738
            .         .|:....:||:|.:..: :..|.|:.|||||.:|.|..:|:|:|:   .||.:.:
Zfish   210 M---------VGDYRGKKVAVKCIKHD-ATAQAFVAEASVMTQLRHNNLVQLLGVIVEEKGSLYI 264

  Fly   739 MVQELAPLGSMLQYILDHGHEITANAELKVWASQIACGMHYLESQHFVHRDLAARNILLTARHQA 803
            :.:.:|. ||::.|:...|..:.....|..::..:...|.|||:.:||||||||||:|::..:.|
Zfish   265 VTEYMAK-GSLVDYLRSRGRTVIGGDRLINFSMDVCKAMEYLEANNFVHRDLAARNVLVSEDNIA 328

  Fly   804 KISDFGMSRSLRPGSTEYQFTQG-GRWPIRWYAPESFNLGIFSHASDVWSFGVTIWEMFSLGAPP 867
            |:||||:::       |...||. .:.|::|.:||:.....||..|||||:|:.:||::|.|..|
Zfish   329 KVSDFGLTK-------EASSTQDTAKLPVKWTSPEALREKKFSTKSDVWSYGILLWEIYSFGRVP 386

  Fly   868 YGEISNVDAIKLVDSGERLPQPNLCPAYIYAVMQSCWKERPKDRPTFVYLTE 919
            |..|...:.:..|:.|.::..|:.||..:|.:|:.||......||:|..|.|
Zfish   387 YPRIPLKEVVPRVEKGYKMDSPDGCPPVVYDIMKQCWTLDAVVRPSFRDLRE 438

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SharkNP_524743.2 SH2_Nterm_shark_like 8..91 CDD:198210
ANKYR <94..317 CDD:440430 11/28 (39%)
ANK repeat 124..151 CDD:293786
ANK repeat 153..184 CDD:293786
ANK repeat 186..217 CDD:293786
ANK repeat 220..245 CDD:293786
SH2_Cterm_shark_like 287..395 CDD:198211 34/107 (32%)
PTKc_Syk_like 666..926 CDD:270650 88/258 (34%)
cskNP_001071067.1 SH3_CSK 11..67 CDD:212703
SH2_csk_like 78..175 CDD:198190 41/277 (15%)
PTKc_Csk 188..443 CDD:133213 92/346 (27%)
Blue background indicates that the domain is not in the aligned region.

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