DRSC/TRiP Functional Genomics Resources

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Protein Alignment Shark and grb2a

DIOPT Version :10

Sequence 1:NP_524743.2 Gene:Shark / 44353 FlyBaseID:FBgn0015295 Length:939 Species:Drosophila melanogaster
Sequence 2:NP_001007770.1 Gene:grb2a / 493609 ZFINID:ZDB-GENE-041121-1 Length:217 Species:Danio rerio


Alignment Length:109 Identity:34/109 - (31%)
Similarity:58/109 - (53%) Gaps:6/109 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 PMKWYHGNLSREAADELLKQGYEDGTFLVRESSTAAGDFVLSLLCQGEVCHYQVRRHGGEDAFFS 71
            |..|::|.:.|..|:|:|.:...||.||:|||.:|.|||.||:....:|.|::|.|.|....|..
Zfish    57 PHPWFYGKIPRAKAEEMLNKQRHDGAFLIRESESAPGDFSLSVKFGNDVQHFKVLRDGAGKYFLW 121

  Fly    72 IDDKVQTKILHGLDTLVDYYQQAANGLPTKLTVPLIRDLPPHNT 115
            :..      .:.|::||||::..:......:.:..|..:|.::|
Zfish   122 VVK------FNSLNSLVDYHRSTSVSRNQPIFLRDIEQVPQNST 159

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SharkNP_524743.2 SH2_Nterm_shark_like 8..91 CDD:198210 29/82 (35%)
ANKYR <94..317 CDD:440430 3/22 (14%)
ANK repeat 124..151 CDD:293786
ANK repeat 153..184 CDD:293786
ANK repeat 186..217 CDD:293786
ANK repeat 220..245 CDD:293786
SH2_Cterm_shark_like 287..395 CDD:198211
PTKc_Syk_like 666..926 CDD:270650
grb2aNP_001007770.1 SH3_GRB2_N 1..56 CDD:212879
SH2_Grb2_like 56..150 CDD:199828 31/98 (32%)
SH3_GRB2_C 160..212 CDD:212882 34/109 (31%)
Blue background indicates that the domain is not in the aligned region.

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