DRSC/TRiP Functional Genomics Resources

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Protein Alignment Shark and syk

DIOPT Version :10

Sequence 1:NP_524743.2 Gene:Shark / 44353 FlyBaseID:FBgn0015295 Length:939 Species:Drosophila melanogaster
Sequence 2:XP_005155595.1 Gene:syk / 405769 ZFINID:ZDB-GENE-040702-3 Length:608 Species:Danio rerio


Alignment Length:921 Identity:222/921 - (24%)
Similarity:338/921 - (36%) Gaps:350/921 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 MKWYHGNLSREAADELLKQGYE-DGTFLVRESSTAAGDFVLSLLCQGEVCHYQVRRH-------- 63
            :.::.||::||.::..|:||.. ||.:|:|:|.:..|.:.|||....:..||.:.|.        
Zfish     8 LPYFFGNITREESEVYLQQGGSGDGLYLLRQSRSFLGGYALSLSYGRQFYHYTIERELNDTYAIA 72

  Fly    64 GGEDAFFSIDDKVQTKILHGLDTLVDYYQQAANGLPTKLTVPLIRDLPPHNTRSHGVTNLLHRAT 128
            ||:.....||             :::|:.|.::||...|..|..|   |..|             
Zfish    73 GGKSHRTPID-------------VINYHSQESDGLICLLKKPFHR---PRGT------------- 108

  Fly   129 SKNESKV-VFELLKCGYRNFDAKNQDGQTALHLAALHSDEDILKHLLNAKVQVNSSDSFGCQPLH 192
               |.|| .||         |.|.|                                        
Zfish   109 ---EPKVGPFE---------DLKEQ---------------------------------------- 121

  Fly   193 YAARSKPASFIRTLISAQANVQGRNIDNGYVPLHEAAKHGNLEAVQELLLAEAPPLPRTSSGEFP 257
                     .||..:....|::|                   .|:.:.::::.|           
Zfish   122 ---------LIRQYVEQTWNLKG-------------------SALDQAIISQRP----------- 147

  Fly   258 FDLAKEAGQTAVEEFLLNYKLPPANTTRDQWYHGTLTREEAVAILKKHAKELLAKQPEVDTSGCF 322
             .|.|....||.|      |:|        |:||.:.||::...|...::          .:|.|
Zfish   148 -QLEKLIATTAHE------KMP--------WFHGKIDREDSELRLLNTSR----------VNGKF 187

  Fly   323 LVRYSESPAAS-GLVLTLLCDQVVKNFRISQADLYQNGNKVQSGGSKFLYIDDGPYWPSVEHLIA 386
            |:|..|:...: ...|.||.:..|.::||         :|.::|.   |.|.||..:.::..|:.
Zfish   188 LIRQRENSGRNESYALCLLHNNQVMHYRI---------DKDRAGK---LSIPDGKKFDTLWQLVE 240

  Fly   387 HFMRFSYGLPVSLKYPVPPQPKPEVPSFATIPRSNMKPKAASPATPPTPVSPHSHHQHPHVPALT 451
            |   :||.....|:......|:|                              |||         
Zfish   241 H---YSYKPDGLLRVLTETCPRP------------------------------SHH--------- 263

  Fly   452 ITKKKQKENSSSMFNTLRLTSPKKALFDMNSLRKNKSKGKRSDSESSVSGSLAGTEQELQAAAPM 516
                                                       ||...:|.:..          .
Zfish   264 -------------------------------------------SERGATGGIIS----------R 275

  Fly   517 LKSLSFSTEFSTFNADGVTGSGAAAAGEVYNVPRNNTPIEIDLPPIAQKTEAEVEYFTKSDVAIE 581
            |||.||..          .|....:|...|.:..|.                      |.|.:.:
Zfish   276 LKSYSFPK----------PGQKKGSAENPYKITPNG----------------------KDDYSKQ 308

  Fly   582 RERAGQWIGNGYQPTMDVLSLLDQQIKAPAVARLNSLGPNASTESEMASYLHRKCSGTPSTPSAT 646
                    ||    .:|....:|.|:                .||..|.         |....:|
Zfish   309 --------GN----FLDSAMPMDTQV----------------YESPYAD---------PDELRST 336

  Fly   647 EVEAAKLRFFIEPEKLVLDREIGHGEFGSVHSGWLLRKSGAGEESRLEVAIKMLSDEHSN---KQ 708
            :|..:.|        .:.|.|:|.|.||:|..|....|     :::..||:|:|.::..|   |.
Zfish   337 KVNRSDL--------TLEDGELGSGNFGTVLRGVYQMK-----KTQKVVAVKILKNDDDNAAVKD 388

  Fly   709 EFLREASVMMRLEHKCIVRLIGIAKGEMLMMVQELAPLGSMLQYILDHGHEITANAELKVWASQI 773
            |.||||:||.:|::..|||:|||.:.|.||:|.|||.||.:.:::..:.|....|  |.....|:
Zfish   389 EMLREANVMQQLDNPYIVRMIGICEAENLMLVMELAELGPLHKFLQKNKHITVKN--LTELVHQV 451

  Fly   774 ACGMHYLESQHFVHRDLAARNILLTARHQAKISDFGMSRSLRPGSTEYQFTQGGRWPIRWYAPES 838
            :.||.|||..:||||||||||:||..:|.|||||||:|::|......|:....|:||::|||||.
Zfish   452 SMGMKYLEEHNFVHRDLAARNVLLVTQHYAKISDFGLSKALTEDENYYKAKGHGKWPLKWYAPEC 516

  Fly   839 FNLGIFSHASDVWSFGVTIWEMFSLGAPPYGEISNVDAIKLVDSGERLPQPNLCPAYIYAVMQSC 903
            .|...||..||||||||.:||.||.|..||..:...:.|:::::|:|:..|..||..:|.:|:.|
Zfish   517 MNYLKFSSKSDVWSFGVLMWEAFSYGQKPYKGMKGNEVIQMIENGQRMSAPPDCPPEMYDLMKKC 581

  Fly   904 WKERPKDRPTF 914
            |..:|.:||.|
Zfish   582 WTYKPDERPGF 592

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SharkNP_524743.2 SH2_Nterm_shark_like 8..91 CDD:198210 23/91 (25%)
ANKYR <94..317 CDD:440430 34/223 (15%)
ANK repeat 124..151 CDD:293786 6/27 (22%)
ANK repeat 153..184 CDD:293786 0/30 (0%)
ANK repeat 186..217 CDD:293786 4/30 (13%)
ANK repeat 220..245 CDD:293786 1/24 (4%)
SH2_Cterm_shark_like 287..395 CDD:198211 27/108 (25%)
PTKc_Syk_like 666..926 CDD:270650 109/252 (43%)
sykXP_005155595.1 SH2_N-SH2_Zap70_Syk_like 8..111 CDD:198191 33/134 (25%)
SH2_C-SH2_Syk_like 159..260 CDD:198264 32/139 (23%)
PTKc_Syk 348..604 CDD:133247 109/252 (43%)

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