DRSC/TRiP Functional Genomics Resources

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Protein Alignment Shark and Grap

DIOPT Version :10

Sequence 1:NP_524743.2 Gene:Shark / 44353 FlyBaseID:FBgn0015295 Length:939 Species:Drosophila melanogaster
Sequence 2:XP_063125579.1 Gene:Grap / 363616 RGDID:1306884 Length:240 Species:Rattus norvegicus


Alignment Length:133 Identity:35/133 - (26%)
Similarity:59/133 - (44%) Gaps:35/133 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 PMKWYHGNLSREAADELLKQGYEDGTFLVRESSTAAGDFVLSL------LCQ------------- 52
            |..||.|.:||:.|:|.|.:....|.||:|||.::.|:|.:|:      .|.             
  Rat    57 PHPWYSGRISRQLAEETLMKRNHLGAFLIRESESSPGEFSVSVKSSQNGACSKGGGRSEVLGPPP 121

  Fly    53 ----GEVCHYQVRRHGGEDAFFSIDDKVQTKILHGLDTLVDYYQQAANGLPTKLTV----PLIRD 109
                .:|.|::|.|. ....:|..::|     .:.|:.|||:|:........::.:    |||: 
  Rat   122 RSYGDQVQHFKVLRE-ASGKYFLWEEK-----FNSLNELVDFYRTTTIAKRRQIFLCDEQPLIK- 179

  Fly   110 LPP 112
             ||
  Rat   180 -PP 181

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SharkNP_524743.2 SH2_Nterm_shark_like 8..91 CDD:198210 28/105 (27%)
ANKYR <94..317 CDD:440430 5/23 (22%)
ANK repeat 124..151 CDD:293786
ANK repeat 153..184 CDD:293786
ANK repeat 186..217 CDD:293786
ANK repeat 220..245 CDD:293786
SH2_Cterm_shark_like 287..395 CDD:198211
PTKc_Syk_like 666..926 CDD:270650
GrapXP_063125579.1 None
Blue background indicates that the domain is not in the aligned region.

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