DRSC/TRiP Functional Genomics Resources

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Protein Alignment Shark and Y50D4B.6

DIOPT Version :10

Sequence 1:NP_524743.2 Gene:Shark / 44353 FlyBaseID:FBgn0015295 Length:939 Species:Drosophila melanogaster
Sequence 2:NP_503375.2 Gene:Y50D4B.6 / 3565593 WormBaseID:WBGene00021745 Length:421 Species:Caenorhabditis elegans


Alignment Length:381 Identity:107/381 - (28%)
Similarity:168/381 - (44%) Gaps:78/381 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   624 TESEMASYLHRKCSGTPST---------------PSATEVE-----AAKLRFFIEPEKLVLDRE- 667
            |.|..:..:|.....|||:               |...|.|     ...|:|   .|:..:|.. 
 Worm    39 TRSLESGIIHSSSQKTPSSVRENESLLQANEENVPIGLETEPINAIIKNLKF---DERFEIDVNK 100

  Fly   668 --------IGHGEFGSVHSGWL--LRKSGAGEESRLEVAIK--MLSDEHSNKQEFLREASVMMRL 720
                    :|:|.:|.|....:  .:|:|...|:.||||:|  :..::.|.:|....|.:||..:
 Worm   101 FSFYNLSFLGNGYYGKVFKERMHKKQKNGLDSENSLEVAVKRALRPEDPSEQQLMCEELNVMCVV 165

  Fly   721 -EHKCIVRLIGIAKGEMLMMVQELAPLGSMLQY--------------ILDHGHEITANAELKVWA 770
             :|..|:.||...:...:::|.|....|.:::|              :.|:| .:....:|..:|
 Worm   166 GKHPNILALIRWIRTNEILIVSEFVEKGDLVEYLRARRRYFNKDIVCVEDNG-RLLCPTDLLSFA 229

  Fly   771 SQIACGMHYLESQHFVHRDLAARNILLTARHQAKISDFGMSRSLRPGSTEYQFTQGGRWPIRWYA 835
            .|||.||.:|.:...||||||.||:.:......:|:|||::| .......|:......:|::|.|
 Worm   230 FQIANGMKFLGNVACVHRDLALRNVFVKRNRIIRIADFGLAR-WHENKEYYRKKTDVGFPMKWLA 293

  Fly   836 PESF-------NLGIFSHASDVWSFGVTIWEMFSLGAPPYGEISNVD--------AIKLVDSGER 885
            ||.|       |:. |...||:||:||.::|:||||..||   ..:|        .:|.|..|.:
 Worm   294 PECFEFEQERENIK-FDSKSDIWSYGVCLYEIFSLGVSPY---EGLDFRPDYFQGLMKYVRDGNQ 354

  Fly   886 LPQPNLCPAYIYAVMQSCWKERPKDRPTFVYLTEFFAR------DPDYQNLPELVQ 935
            ||.|......||..|||||...|..||.|....:||.:      .|.::||.:.:|
 Worm   355 LPSPEHGSDKIYEFMQSCWNLNPDKRPVFSECRDFFQKLLQQVSKPFFENLLKEIQ 410

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SharkNP_524743.2 SH2_Nterm_shark_like 8..91 CDD:198210
ANKYR <94..317 CDD:440430
ANK repeat 124..151 CDD:293786
ANK repeat 153..184 CDD:293786
ANK repeat 186..217 CDD:293786
ANK repeat 220..245 CDD:293786
SH2_Cterm_shark_like 287..395 CDD:198211
PTKc_Syk_like 666..926 CDD:270650 90/308 (29%)
Y50D4B.6NP_503375.2 PTKc 109..391 CDD:270623 89/287 (31%)
Blue background indicates that the domain is not in the aligned region.

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