DRSC/TRiP Functional Genomics Resources

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Protein Alignment Shark and Abl2

DIOPT Version :10

Sequence 1:NP_524743.2 Gene:Shark / 44353 FlyBaseID:FBgn0015295 Length:939 Species:Drosophila melanogaster
Sequence 2:NP_001382059.1 Gene:Abl2 / 304883 RGDID:1590898 Length:1182 Species:Rattus norvegicus


Alignment Length:497 Identity:140/497 - (28%)
Similarity:220/497 - (44%) Gaps:108/497 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   450 LTITKKKQKE----NSSSMFNTLRLTS-----PKKALFDMNSLRKNK---SKGKRSDSE----SS 498
            |:|||.::..    |.:..::.:|..:     |...:..:|||.|:.   ....||.:|    |.
  Rat   126 LSITKGEKLRVLGYNQNGEWSEVRSKNGQGWVPSNYITPVNSLEKHSWYHGPVSRSAAEYLLSSL 190

  Fly   499 VSGSLAGTEQELQAAAPMLKSLSFSTEFSTFNADGVTGSGAAAAGEVYNVPRNNTPIEIDLPPIA 563
            ::||....|.|   ::|...|:|...|                 |.||:...|.|          
  Rat   191 INGSFLVRESE---SSPGQLSISLRYE-----------------GRVYHYRINTT---------- 225

  Fly   564 QKTEAEVEYFTKSDVAIERERAGQWIGNGYQPTMDVLSLLDQQIKAPAVARLNSLGPNASTESEM 628
                                                   .|.::...|.:|.::|.......|.:
  Rat   226 ---------------------------------------TDSKVYVTAESRFSTLAELVHHHSTV 251

  Fly   629 AS-------YLHRKCSGTPSTPSATEVEAAKLRFFIEPEKLVLDREIGHGEFGSVHSG-WLLRKS 685
            |.       |...||    :.|:...|.....::.:|...:.:..::|.|::|.|:.| |     
  Rat   252 ADGLVTTLHYPAPKC----NKPTVYGVSPIHDKWEMERTDITMKHKLGGGQYGEVYVGVW----- 307

  Fly   686 GAGEESRLEVAIKMLSDEHSNKQEFLREASVMMRLEHKCIVRLIGIAKGE-MLMMVQELAPLGSM 749
               ::..|.||:|.|.::....:|||:||:||..::|..:|:|:|:...| ...:|.|..|.|::
  Rat   308 ---KKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTLEPPFYIVTEYMPYGNL 369

  Fly   750 LQYILDHGHEITANAELKVWASQIACGMHYLESQHFVHRDLAARNILLTARHQAKISDFGMSRSL 814
            |.|:.:...|......|...|:||:..|.|||.::|:||||||||.|:...|..|::|||:|| |
  Rat   370 LDYLRECSREEVTAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHVVKVADFGLSR-L 433

  Fly   815 RPGSTEYQFTQGGRWPIRWYAPESFNLGIFSHASDVWSFGVTIWEMFSLGAPPYGEISNVDAIKL 879
            ..|.| |....|.::||:|.||||.....||..||||:|||.:||:.:.|..||..|.......|
  Rat   434 MTGDT-YTAHAGAKFPIKWTAPESLAYNTFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYDL 497

  Fly   880 VDSGERLPQPNLCPAYIYAVMQSCWKERPKDRPTFVYLTEFF 921
            ::.|.|:.||..||..:|.:|::|||..|.|||:|....:.|
  Rat   498 LEKGYRMEQPEGCPPKVYELMRACWKWSPADRPSFAETHQAF 539

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SharkNP_524743.2 SH2_Nterm_shark_like 8..91 CDD:198210
ANKYR <94..317 CDD:440430
ANK repeat 124..151 CDD:293786
ANK repeat 153..184 CDD:293786
ANK repeat 186..217 CDD:293786
ANK repeat 220..245 CDD:293786
SH2_Cterm_shark_like 287..395 CDD:198211
PTKc_Syk_like 666..926 CDD:270650 100/258 (39%)
Abl2NP_001382059.1 SH3_Abl 111..164 CDD:212784 7/37 (19%)
SH2_ABL 169..262 CDD:198189 24/161 (15%)
PTKc_Abl 281..543 CDD:270645 101/269 (38%)
FABD 1063..1182 CDD:197885
Blue background indicates that the domain is not in the aligned region.

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