DRSC/TRiP Functional Genomics Resources

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Protein Alignment Shark and Crkl

DIOPT Version :10

Sequence 1:NP_524743.2 Gene:Shark / 44353 FlyBaseID:FBgn0015295 Length:939 Species:Drosophila melanogaster
Sequence 2:NP_001008285.1 Gene:Crkl / 287942 RGDID:1308531 Length:303 Species:Rattus norvegicus


Alignment Length:277 Identity:71/277 - (25%)
Similarity:108/277 - (38%) Gaps:76/277 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 SDPMKWYHGNLSREAADELLKQGYEDGTFLVRESSTAAGDFVLSLLCQGEVCHYQV-----RRHG 64
            ||...||.|.:||:.|...| ||...|.||||:|||..||:|||:.....|.||.:     ||..
  Rat     9 SDRSAWYMGPVSRQEAQTRL-QGQRHGMFLVRDSSTCPGDYVLSVSENSRVSHYIINSLPNRRFK 72

  Fly    65 -GEDAFFSIDDKVQTKILHGLDTLVDYYQQAANGLPTKLTVPLIR-DLPPHNT-----RSHGVTN 122
             |:..|..:...::...:|.|||             |.|..|..| ..||..:     .|....|
  Rat    73 IGDQEFDHLPALLEFYKIHYLDT-------------TTLIEPAPRYPNPPMGSVSAPNLSTAEEN 124

  Fly   123 LLHRAT--------------SKNESKVVFELLKCGYRNFDAKNQDGQTALHLAALHSDEDILKHL 173
            |.:..|              .|.|..|:.|  |...:.:.|:|:||:..  :..:...|.:::..
  Rat   125 LEYVRTLYDFPGNDAEDLPFKKGELLVIIE--KPEEQWWSARNKDGRVG--MIPVPYVEKLVRSS 185

  Fly   174 LNAKVQVNSSDSFGC-QPLHYAARSKPASFIRTLISAQANVQGRNIDNGYVPLHEAAKHGNLEAV 237
            .:.|....:|:|:|. :|.|..|:.:..:.:.|:    |:..|..|:                  
  Rat   186 PHGKHGNRNSNSYGIPEPAHAYAQPQTTTPLPTV----ASTPGAAIN------------------ 228

  Fly   238 QELLLAEAPPLPRTSSG 254
                     |||.|.:|
  Rat   229 ---------PLPSTQNG 236

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SharkNP_524743.2 SH2_Nterm_shark_like 8..91 CDD:198210 33/88 (38%)
ANKYR <94..317 CDD:440430 36/182 (20%)
ANK repeat 124..151 CDD:293786 7/40 (18%)
ANK repeat 153..184 CDD:293786 4/30 (13%)
ANK repeat 186..217 CDD:293786 7/31 (23%)
ANK repeat 220..245 CDD:293786 0/24 (0%)
SH2_Cterm_shark_like 287..395 CDD:198211
PTKc_Syk_like 666..926 CDD:270650
CrklNP_001008285.1 SH2_CRK_like 6..106 CDD:198180 39/110 (35%)
SH3_CRK_N 126..180 CDD:212692 10/57 (18%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 184..204 4/19 (21%)
SH3_CRK_C 237..293 CDD:212693 71/277 (26%)
Blue background indicates that the domain is not in the aligned region.

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