DRSC/TRiP Functional Genomics Resources

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Protein Alignment Shark and C34F11.5

DIOPT Version :9

Sequence 1:NP_524743.2 Gene:Shark / 44353 FlyBaseID:FBgn0015295 Length:939 Species:Drosophila melanogaster
Sequence 2:NP_494971.1 Gene:C34F11.5 / 266855 WormBaseID:WBGene00016416 Length:894 Species:Caenorhabditis elegans


Alignment Length:545 Identity:121/545 - (22%)
Similarity:213/545 - (39%) Gaps:131/545 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   411 VPSFATIPR----SNMKPKAASPATPPTPVSPHSHHQHPHVPALTITKKKQKENS---SSMFNTL 468
            :|.|:...|    ...|.|.|....|           ||...||....:|:|..:   :....|.
 Worm     1 MPKFSKEDRKKHKKTRKKKEAKGNNP-----------HPRTIALKDAARKRKTKTLIRAEPLETS 54

  Fly   469 RLTSPKKALFDMNSLRKNKSKGKRSDSESSVSGSLAGTEQE-----LQAAAPMLKSLSFSTEFST 528
            ..:|.::...|.....:.|.:.:|...:....|.:..||.|     .:....:::|:.|      
 Worm    55 YGSSKRRRPNDWKKKMRKKERKRRYFRQDWFWGMITQTEAEGHLKDCRHGEFLVRSMLF------ 113

  Fly   529 FNADGVTGSGAAAAGEVYNVPRNNTPIEIDLPPIAQKTEAEVEYFTKSDVAIERERAGQWIGNGY 593
                                 ::|..:.||:..::.|:.. .:.|..|.|      ..:|     
 Worm   114 ---------------------QDNPIVVIDVVVVSDKSRT-FQQFQASPV------VSKW----- 145

  Fly   594 QPTMDVLSLLDQQIKAPAVARLNSLGPNASTESEMASYLHRKCSGTPSTPSATEVEAAKLRFFIE 658
                                :|:|......|..::.:|.:|...|  .|....:..|.:..:|::
 Worm   146 --------------------QLDSYPSRHKTLVDLVAYYNRHFIG--MTGLKLKTAAKQPDWFLK 188

  Fly   659 PEKLVLDR---EIGHGEFGSVHSGWLLRKSGAGEESRLEVAIKMLSDEHS----NKQEFLREASV 716
            ...::..:   .:|.|::|.|         ..|...|..||||.|:....    :::..|:||..
 Worm   189 SYNIMCPKNAVNLGSGQYGCV---------AIGAYRRRLVAIKKLTSSGERLLLDREALLKEAMF 244

  Fly   717 MMRLEHKCIVRLIGIA--KGEMLMMVQELA-PLGSMLQYILDHGHEITANAE-LKVWASQIACGM 777
            |.:|:|..|.::|||:  |...:::::.:| ||   |.::..:|...|...: |.:|  |:|.|:
 Worm   245 MQKLQHPYITKIIGISIDKTPPMLLIELMACPL---LDHLQKYGKYTTIGEKLLYLW--QLARGL 304

  Fly   778 HYLESQHFVHRDLAARNILLTARHQAKISDFGMSRSLRPGSTEYQF------TQGGRWPIRWYAP 836
            .::..::.||||:||||:|.:.....|:||.|:|        :|:.      |...|.|..|..|
 Worm   305 SFMAKENVVHRDIAARNVLFSRHGIVKVSDLGLS--------DYESKLQAVNTSKERLPRAWLPP 361

  Fly   837 ESFNL---GIFSHASDVWSFGVTIWEMFSLGAPPYGEISNVDAI----KLVDSGERLPQPNLCPA 894
            ||.:.   ..|:..:|||.||.|..|:|..|.|||.|:...:|:    ...|....|..|....:
 Worm   362 ESVSKTGGNKFNEKTDVWMFGATSVEVFQNGQPPYHELKWKEALPRLQNFKDGDNLLVFPKYASS 426

  Fly   895 YIYAVMQS-CWKERPKDRPTFVYLT 918
            .|:|...: .:|...:||..|..:|
 Worm   427 EIHAFYSTKVFKRVNEDRVNFEEIT 451

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SharkNP_524743.2 SH2_Nterm_shark_like 8..91 CDD:198210
Ank_2 <112..184 CDD:289560
ANK 117..241 CDD:238125
ANK repeat 124..151 CDD:293786
ANK repeat 153..184 CDD:293786
Ank_2 158..247 CDD:289560
ANK repeat 186..217 CDD:293786
ANK repeat 220..245 CDD:293786
Ank_4 224..274 CDD:290365
SH2_Cterm_shark_like 287..395 CDD:198211
TyrKc 662..921 CDD:197581 80/282 (28%)
PTKc_Syk_like 666..926 CDD:270650 80/278 (29%)
C34F11.5NP_494971.1 SH2 82..170 CDD:214585 19/146 (13%)
PTKc 201..455 CDD:270623 80/273 (29%)
TyrKc 201..454 CDD:197581 80/273 (29%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160167208
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.840

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