DRSC/TRiP Functional Genomics Resources

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Protein Alignment Shark and old-2

DIOPT Version :10

Sequence 1:NP_524743.2 Gene:Shark / 44353 FlyBaseID:FBgn0015295 Length:939 Species:Drosophila melanogaster
Sequence 2:NP_496123.1 Gene:old-2 / 191738 WormBaseID:WBGene00003863 Length:498 Species:Caenorhabditis elegans


Alignment Length:447 Identity:134/447 - (29%)
Similarity:204/447 - (45%) Gaps:76/447 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   517 LKSLSFSTEFSTFNADGVTGSGAAAAGEVYNVPRNNTPIEIDLPPIAQKTEAEVEYFTKSDVAIE 581
            ::.:.|.:.:|.|.|..:   |.....:.|...:...|        |.:::.. ||..:...|.:
 Worm    51 VQQIIFISLYSVFVALAI---GICCLIKAYKSKKRQLP--------ANRSKGN-EYLLEPTTADQ 103

  Fly   582 RERAGQWIGNGYQPTMDVLSLLDQQIKAPAVARLNS--------LGPNASTESEMASYLHRKCSG 638
            ::|....|.........:.|..|...|.|  :||::        |.|    .::...|||     
 Worm   104 KKRYSNNIVPPEPTPYPITSGEDDFGKTP--SRLSNEECPPELKLAP----INDRIKYLH----- 157

  Fly   639 TPSTPSATEVEAAKLRFFIEPEKLVLD--REIGHGEFGSVHSGWLLRKSGAGE--ESRLEVAIKM 699
                 ...|||       |..|.|.:.  |.:|.||||.:..|:|..|:...:  |||||||:|.
 Worm   158 -----YYAEVE-------INEEDLDISKGRPLGSGEFGIIRKGFLRSKNSKNKETESRLEVAVKS 210

  Fly   700 LSDEHSNKQEFL--REASVMMRL-EHKCIVRLI-GIAKGEMLMMVQELAPLGSMLQYILDHGHEI 760
            ..:|:::.|:.|  .|..||..: :|..|:.|: ||..||..|::.||...|.:|.::..:....
 Worm   211 PLNEYNHIQQELIYDELKVMCAVGKHPNILALVGGITIGEKRMIISELVENGDLLSFLRKNRRNF 275

  Fly   761 TAN-------------AELKVWASQIACGMHYLESQHFVHRDLAARNILLTARHQAKISDFGMSR 812
            |.:             .:|..:|.|||.||.||.....||||||.||:|:......:|:|||::|
 Worm   276 TIDQLAFEPEKPSLGLVDLVSFAFQIAKGMEYLIHVPCVHRDLALRNVLIKGNMVIRIADFGLAR 340

  Fly   813 SLRPGSTEYQFTQG--GRWPIRWYAPESFNLGIFSHASDVWSFGVTIWEMFSLGAPPYGEISNVD 875
              |..:.:|..||.  ...||.|.||||.:..:|:..|||||:||.::|:||||..||..:...|
 Worm   341 --RHKNKDYYKTQSVDTPLPIHWMAPESIDKLLFTQKSDVWSYGVCLYELFSLGKSPYKNVIKYD 403

  Fly   876 --------AIKLVDSGERLPQPNLCPAYIYAVMQSCWKERPKDRPTFVYLTEFFARD 924
                    .:..::.|:||.||....|.||.||:.||......|.||:...|||.::
 Worm   404 ERDSYCKYVLAYLNEGKRLAQPAHADAEIYNVMKLCWDLDMNSRTTFLDCIEFFEKE 460

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SharkNP_524743.2 SH2_Nterm_shark_like 8..91 CDD:198210
ANKYR <94..317 CDD:440430
ANK repeat 124..151 CDD:293786
ANK repeat 153..184 CDD:293786
ANK repeat 186..217 CDD:293786
ANK repeat 220..245 CDD:293786
SH2_Cterm_shark_like 287..395 CDD:198211
PTKc_Syk_like 666..926 CDD:270650 104/288 (36%)
old-2NP_496123.1 PTKc 175..458 CDD:270623 103/284 (36%)
Blue background indicates that the domain is not in the aligned region.

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