DRSC/TRiP Functional Genomics Resources

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Protein Alignment Shark and R11E3.1

DIOPT Version :10

Sequence 1:NP_524743.2 Gene:Shark / 44353 FlyBaseID:FBgn0015295 Length:939 Species:Drosophila melanogaster
Sequence 2:NP_500644.2 Gene:R11E3.1 / 187810 WormBaseID:WBGene00020003 Length:549 Species:Caenorhabditis elegans


Alignment Length:476 Identity:128/476 - (26%)
Similarity:208/476 - (43%) Gaps:82/476 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   452 ITKKKQKENSSSMFNTLR--LTSPKKALFDMNSLRKNKSKGKRSDSESSVSGSLAGTEQELQAAA 514
            |.||..:|.::......|  ||:..:   :..|.:|::....|.| ||:.|.|:. .|:::....
 Worm    10 IKKKSIRETTTDETQERRPDLTTASE---EKGSEKKDEKGSDRKD-ESATSKSVY-VEKDVVEDE 69

  Fly   515 PMLKSLS---FSTEFSTFNADGV----TGSGAAAAGEVYNVPRNNTPIEIDLPPIAQKTE---AE 569
            .:.|||.   |...|...:..||    .|.......|:.......|.|:.|:......:|   .|
 Worm    70 ELYKSLQAMPFYHGFLPRDDLGVIIRNEGDYLIRVSEITTKKEGTTGIKRDIILSVCSSERGGTE 134

  Fly   570 VEYF-TKSDVAIERERAGQWIGNGYQPTMDVLSLLDQQIKAPAVARLN-------SLGPNASTES 626
            .|.. ||||...|                  |:|.:::::...:.|.:       :|.|  :.|:
 Worm   135 TEQTNTKSDAKSE------------------LNLGERKMRNMVIRRFDGKFGIKGNLFP--TIEA 179

  Fly   627 EMASYLHRKCSGTPSTPSATEVEAAKLRFFIEP----------EKLVLDREIGHGEFGSVHSGWL 681
            .:|:| |          ....:|..:.||...|          ..:.|..::|.|.:|.|..|.|
 Worm   180 LLANY-H----------VTNALETKENRFLKTPIDLQVWENRHSAVKLGDKLGEGAYGEVRKGVL 233

  Fly   682 LRKSGAGEESRLEVAIKMLSDEHSNK---QEFLREASVMMRLEHKCIVRLIGIAKGEM-LMMVQE 742
            .||:     .:|:||:|::.....||   :|.:.||.:|...:||.|||..|:|..|. |.::.|
 Worm   234 HRKN-----KKLDVAVKLMKGGELNKMKIREMMNEARLMRNFKHKNIVRFFGVAVVEQPLYILLE 293

  Fly   743 LAPLGSMLQYILDHGHEITANAELKVWASQIACGMHYLESQHFVHRDLAARNILLTARHQAKISD 807
            |...|::..|:..:.   .::.||.......|.|:.||.:.|.:|||:||||.|.:.....|:||
 Worm   294 LVNGGALNTYLQKNK---VSDLELMRMCLGAAQGLQYLHANHCIHRDIAARNCLYSNDKVVKLSD 355

  Fly   808 FGMSRSLRPGSTEYQFTQGGRWPIRWYAPESFNLGIFSHASDVWSFGVTIWEMFSLGAPPYGEIS 872
            ||:|    ....:|:.....:.||:|.|||:.....|:..:||:|:||..:|:||.||.|:..::
 Worm   356 FGLS----VVGNQYKLCAAQKLPIKWLAPETITTRFFTPKTDVYSYGVMCFEIFSNGAEPWEGVT 416

  Fly   873 NVDAIKLVDSGERLPQPNLCP 893
            |......|.:|..|..|..||
 Worm   417 NTVTKNNVVNGINLVIPESCP 437

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SharkNP_524743.2 SH2_Nterm_shark_like 8..91 CDD:198210
ANKYR <94..317 CDD:440430
ANK repeat 124..151 CDD:293786
ANK repeat 153..184 CDD:293786
ANK repeat 186..217 CDD:293786
ANK repeat 220..245 CDD:293786
SH2_Cterm_shark_like 287..395 CDD:198211
PTKc_Syk_like 666..926 CDD:270650 78/232 (34%)
R11E3.1NP_500644.2 SH2_Fps_family 73..191 CDD:198224 29/148 (20%)
PTKc 218..467 CDD:270623 78/232 (34%)
Blue background indicates that the domain is not in the aligned region.

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