DRSC/TRiP Functional Genomics Resources

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Protein Alignment Shark and sid-3

DIOPT Version :10

Sequence 1:NP_524743.2 Gene:Shark / 44353 FlyBaseID:FBgn0015295 Length:939 Species:Drosophila melanogaster
Sequence 2:NP_510783.2 Gene:sid-3 / 181756 WormBaseID:WBGene00002207 Length:1237 Species:Caenorhabditis elegans


Alignment Length:282 Identity:110/282 - (39%)
Similarity:158/282 - (56%) Gaps:12/282 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly   641 STPSATEVEAAKLRFFIEPEKLVLDREIGHGEFGSVHSGWLLRKSGAGEESRLEVAIKMLSDEHS 705
            |.|:...::...|   |..|::.|...||.|.|..|..|...:.:|    :.:.||:|:|.|...
 Worm    89 SMPAQNSIDEKAL---IPNEQIKLYELIGEGSFAVVKRGTWTQSNG----THVNVAVKILRDISP 146

  Fly   706 NKQEFLR-EASVMMRLEHKCIVRLIGIAKGEMLMMVQELAPLGSMLQYILDHGHEITANAELKVW 769
            |..:.|| |||.:::|:|..::||.||.: :..|||.||...||:|..:.|....|...:.|..:
 Worm   147 NIMDDLRVEASHLLKLQHPSLIRLYGIVR-QPAMMVFELCEGGSLLDRLRDDKKAILLVSRLHDY 210

  Fly   770 ASQIACGMHYLESQHFVHRDLAARNILLTARHQ--AKISDFGMSRSLRPGSTEYQFTQGGRWPIR 832
            ..|||..:.:|||:|.||||:||||||| ||.:  .||.|||:.|:|:.....|......:.|..
 Worm   211 CMQIAKALQFLESKHCVHRDVAARNILL-ARDERTVKICDFGLMRALKENEQMYTMAPQKKVPFA 274

  Fly   833 WYAPESFNLGIFSHASDVWSFGVTIWEMFSLGAPPYGEISNVDAIKLVDSGERLPQPNLCPAYIY 897
            |..||:.....|||||||||:||||||:|:.|..|:.....:|.:|.:|:||||.:|..|...||
 Worm   275 WCPPEALRHRKFSHASDVWSYGVTIWEVFTFGEEPWVGCRAIDVLKNIDAGERLEKPKYCSERIY 339

  Fly   898 AVMQSCWKERPKDRPTFVYLTE 919
            .:|::|||..|.:|..|..:.|
 Worm   340 QIMKNCWKFNPAERCKFGAIRE 361

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SharkNP_524743.2 SH2_Nterm_shark_like 8..91 CDD:198210
ANKYR <94..317 CDD:440430
ANK repeat 124..151 CDD:293786
ANK repeat 153..184 CDD:293786
ANK repeat 186..217 CDD:293786
ANK repeat 220..245 CDD:293786
SH2_Cterm_shark_like 287..395 CDD:198211
PTKc_Syk_like 666..926 CDD:270650 104/257 (40%)
sid-3NP_510783.2 SAM_TNK-like 9..70 CDD:188938
PTKc_Ack_like 111..365 CDD:270636 104/257 (40%)
SH3 371..421 CDD:214620
GTPase_binding 472..>522 CDD:430374
PHA03247 <783..1042 CDD:223021
Blue background indicates that the domain is not in the aligned region.

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