DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Shark and plc-3

DIOPT Version :10

Sequence 1:NP_524743.2 Gene:Shark / 44353 FlyBaseID:FBgn0015295 Length:939 Species:Drosophila melanogaster
Sequence 2:NP_496205.2 Gene:plc-3 / 174586 WormBaseID:WBGene00004038 Length:1350 Species:Caenorhabditis elegans


Alignment Length:442 Identity:96/442 - (21%)
Similarity:164/442 - (37%) Gaps:161/442 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 WYHGNLSREAADELLKQGYEDGTFLVRESSTAAGDFVLSLLCQGEVCHYQVRRHGGEDAFFSIDD 74
            |:.....:|.|:|||....|||.||:|.|||.:..:||||...||..||:::|.|   ..|.::.
 Worm   715 WFSATADKEKAEELLSLVPEDGAFLIRTSSTDSSVYVLSLKVDGEFWHYRLKRDG---RIFVVNQ 776

  Fly    75 KVQTKILHGLDTLVDYY--QQAANGLPTKLTVPLIRDLPPHNTRSHGVTNLLHRATSKNESKVVF 137
            ||    ...|:.:|::|  ::...|:..:..|                       ..|:.|.:..
 Worm   777 KV----FENLNQIVEFYANREFVRGISLRFPV-----------------------NEKDISHLT
A 814

  Fly   138 ELLK-----CGYRNFDAKNQDGQT---ALHLAALHSDEDILKHLLNAKVQVNSSDSFGCQPLHYA 194
            ||.:     |   ..|.|:.|.:.   ||......:|:::                         
 Worm   815 ELAEARTPGC---YMDLKDLDKEVQARALRPYRGTADDEL------------------------- 851

  Fly   195 ARSKPASFIRTLISAQANV-QGRNIDNGYVPLHEAAKHGNLEA------VQELLLAEAPPLPRTS 252
              |.||:.|.|::..:..: :||              :|:|..      |||:|     |...::
 Worm   852 --SFPANVIITVLRKEEGLWRGR--------------YGSLTGWFPSAHVQEIL-----PEKVST 895

  Fly   253 SGEFPFDLAKEAGQTAVE-----------------EFLLN--YKLPPANTTR--DQWYHG--TLT 294
            |....::..:.|| |.:|                 :..:|  |.|..|:::.  |.|.:.  .||
 Worm   896 SETSNYNTIELAG-TLIERIHDADRPNVIRISQSNQHWMNKQYYLLAASSSEEADGWQNNLFELT 959

  Fly   295 R--EEAVAILKKHAKELLAKQPEVDTSGCFLVRYSES----PA-------------ASGLVLTLL 340
            |  ...::||:...||   |:...:.|.  ||.|.::    ||             ..|.:    
 Worm   960 RSVNTKMSILRTKEKE---KRIAAELSN--LVVYCQAVPFDPAHIYNDAFYEMCSFVEGKL---- 1015

  Fly   341 CDQVVK------NFRISQADLYQNGNKVQSGGSKFLYIDDGPYWPSVEHLIA 386
             |::|:      |.| ..:.:|.||:::.|..     ....|.|.:..|::|
 Worm  1016 -DKLVEKGLLPFNSR-KLSRVYPNGSRITSNN-----YSPVPMWNAGCHMVA 1060

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SharkNP_524743.2 SH2_Nterm_shark_like 8..91 CDD:198210 30/80 (38%)
ANKYR <94..317 CDD:440430 46/262 (18%)
ANK repeat 124..151 CDD:293786 6/31 (19%)
ANK repeat 153..184 CDD:293786 4/33 (12%)
ANK repeat 186..217 CDD:293786 6/31 (19%)
ANK repeat 220..245 CDD:293786 6/30 (20%)
SH2_Cterm_shark_like 287..395 CDD:198211 28/127 (22%)
PTKc_Syk_like 666..926 CDD:270650
plc-3NP_496205.2 PH-like 74..191 CDD:473070
EFh_PI-PLC 196..339 CDD:333715
EF-hand motif 196..226 CDD:320029
EF-hand motif 233..254 CDD:320029
EF-hand motif 259..292 CDD:320029
EF-hand motif 302..339 CDD:320029
PI-PLCc_GDPD_SF 351..>494 CDD:472694
SH2_N-SH2_PLC_gamma_like 600..696 CDD:199829
SH2_C-SH2_PLC_gamma_like 710..813 CDD:198186 35/127 (28%)
SH3 833..886 CDD:214620 12/93 (13%)
PLCYc 983..1092 CDD:128454 19/91 (21%)
C2_PLC_like 1110..1222 CDD:175974
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.